|
Error in merge_metaphlan_tables.py
|
|
1
|
31
|
May 19, 2025
|
|
HUMAnN 3.9: Low percentage in “Selected species explain X% of predicted community composition”
|
|
2
|
25
|
May 19, 2025
|
|
PhyloPhlAn in Galaxy: Requesting test database for phylophlan_assign_sgbs
|
|
0
|
10
|
May 18, 2025
|
|
Large percentage of unmapped pathways,
|
|
4
|
53
|
May 16, 2025
|
|
Humann 4.0 alpha in workflow
|
|
5
|
200
|
May 16, 2025
|
|
Number of Reads Metagenomic Data for Maaslin3
|
|
6
|
85
|
May 15, 2025
|
|
Using Maaslin to study effects OF microbiota ON something?
|
|
1
|
43
|
May 13, 2025
|
|
Bad id problem from bmtagger while running kneaddata v.0.7.10
|
|
3
|
2720
|
May 13, 2025
|
|
General Questions: Visualization
|
|
0
|
11
|
May 12, 2025
|
|
Associate changes in metabolites and changes in taxa with Maaslin2
|
|
5
|
60
|
May 12, 2025
|
|
Question about fixed vs random effects in Maaslin3
|
|
4
|
95
|
May 12, 2025
|
|
Errors in masaslin3 presence/absence results
|
|
4
|
114
|
May 9, 2025
|
|
Kneaddata_database --download human_genome bowtie2
|
|
1
|
45
|
May 9, 2025
|
|
Conda for biobakery_workflow for 4.0.0a1
|
|
1
|
24
|
May 9, 2025
|
|
Error Using --write-details in waafle_orgscorer (WAAFLE Tutorial Step 3)
|
|
0
|
6
|
May 8, 2025
|
|
Annotation with phyla data
|
|
0
|
9
|
May 8, 2025
|
|
Chocophlan version
|
|
0
|
5
|
May 8, 2025
|
|
Question about reference parameter in maaslin3
|
|
5
|
52
|
May 7, 2025
|
|
MetaPhlAn did not detect any taxa in the tutorial sample
|
|
0
|
38
|
April 28, 2025
|
|
Phylophlan not considering all the MAGs for creation of .tre file
|
|
0
|
12
|
April 25, 2025
|
|
Performing "taxon specific scaling" with only MTX data
|
|
2
|
12
|
April 23, 2025
|
|
MTX Synthetic Identifying True Positives
|
|
3
|
26
|
April 23, 2025
|
|
HUMAnN - RuntimeError: can't allocate lock
|
|
2
|
18
|
April 23, 2025
|
|
Humann3 without prior metaphlan run
|
|
4
|
74
|
April 21, 2025
|
|
Can not find several GGB numbers
|
|
0
|
35
|
April 19, 2025
|
|
Install and running Humann for the first time
|
|
2
|
43
|
April 18, 2025
|
|
Questions about choosing analysis method Masslin3
|
|
17
|
281
|
April 17, 2025
|
|
Maaslin relative abundance re-calculation
|
|
1
|
35
|
April 15, 2025
|
|
Question on quantifying the LGT events in waafle
|
|
6
|
524
|
April 12, 2025
|
|
What are typical unmapped and unintegrated fractions
|
|
1
|
36
|
April 11, 2025
|