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About the Kneaddata category
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0
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810
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October 28, 2019
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Is KneadData recommended for mouse fecal shotgun metagenomic samples?
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2
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18
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December 17, 2025
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KneadData — Need clarification on the exact input file names used at each internal step
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1
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44
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November 7, 2025
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Custom Adapter Sequence in Kneaddata
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2
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52
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September 30, 2025
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Kneaddata output as input for metaphlan
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1
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31
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September 30, 2025
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Kneaddata tar of human_genome uncompresses in subdirectory
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2
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52
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June 25, 2025
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Kneaddata Outputting Disordered Paired Reads
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0
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46
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June 20, 2025
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Bad id problem from bmtagger while running kneaddata v.0.7.10
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3
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2754
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May 13, 2025
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Kneaddata_database --download human_genome bowtie2
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1
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123
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May 9, 2025
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Unable to download and install Kneaddata database
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21
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3032
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March 19, 2025
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Empty paired files
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3
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143
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March 14, 2025
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Kneaddata - a non very explicit error message
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4
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1408
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February 19, 2025
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The output of KneadData differs when threads are used
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3
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108
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February 6, 2025
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There are small unmatched reads in paired reads of kneaddata result
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1
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85
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January 14, 2025
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The output of KneadData differs when threads are used
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0
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53
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January 9, 2025
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Citation please
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2
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179
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December 31, 2024
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All paired-end read unmatched
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34
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6036
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December 25, 2024
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Kneaddata final pair output is 0
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1
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91
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December 25, 2024
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Java error after new install
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1
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201
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December 6, 2024
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Do I have to remove overlapping reads from paire_end data before Metahplan?
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0
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25
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November 27, 2024
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Invalid or corrupt jar file error from Trimmomatic
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0
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64
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November 1, 2024
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KneadData, starting with BAM files
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0
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20
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October 24, 2024
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Size of the paired Kneaddata output file is 0
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3
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98
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October 23, 2024
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Is there a way to look for kneaddata version without log file?
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0
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14
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October 5, 2024
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Problem with paired end demo on new install
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15
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2527
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October 4, 2024
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Kneaddata installed with conda is not available
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9
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3027
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October 1, 2024
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Kneaddata paired output have different names
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0
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38
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September 19, 2024
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Kneaddata fails with message: Killed
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1
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163
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September 5, 2024
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Adapters options
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0
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31
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August 31, 2024
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Kneaddata tossing roughly half of the reads at the trimmomatic step
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0
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29
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August 29, 2024
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