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About the Kneaddata category
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0
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185
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October 28, 2019
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Trim Overrepresented Effect Downstream
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0
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3
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June 24, 2021
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Kneaddata_SILVA rRNA database error_link to database & direct downloads
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15
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51
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June 24, 2021
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Section Links Broken
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0
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6
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June 17, 2021
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Unknown bowtie2 errors
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1
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169
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June 15, 2021
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Kneaddata log file error
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2
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126
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June 15, 2021
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Kneaddata's version can not match
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1
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68
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June 3, 2021
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KneadData for dual-transcriptome RNA-seq data
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1
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60
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June 3, 2021
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Kneaddata Reformatting file sequence identifiers ... Type error
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1
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36
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June 3, 2021
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Discard read by minimum length
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1
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66
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June 3, 2021
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Adapter file isn't passed to trimmomatic when some trimmomatic options are specified
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1
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46
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June 3, 2021
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Kneaddata:Bowtie2 error: skipping reads
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1
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47
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June 3, 2021
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Warning in kneaddata.utilities, unable to remove file
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4
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132
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May 28, 2021
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Kneaddata 0.10 produces unordered pairs of reads
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0
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39
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May 9, 2021
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"ERROR: Unable to write file" when '--bypass-trim' is used
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0
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48
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May 7, 2021
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Kneaddata v0.10.0 - unrecognized arguments: --mode strict
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6
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54
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May 3, 2021
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Paired-end data results in unpaired output
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10
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369
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May 3, 2021
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Massive difference between paired reads' counts
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1
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53
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May 1, 2021
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Would it be a problem for us to use the samtools restrictions on allowable characters in sequence names?
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0
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84
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December 9, 2020
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Unable to download and install Kneaddata database
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7
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330
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April 15, 2021
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Kneaddata problem
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1
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95
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April 8, 2021
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Kneaddata paired output ordering or interleaving
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1
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81
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March 24, 2021
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KneadData workfolw Installation problem
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1
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332
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January 15, 2021
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Kneaddata FASTQ header problem
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8
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493
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March 19, 2021
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Filtering human reads from WGS dataset
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0
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62
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March 11, 2021
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Plans to port kneaddata to a workflow management system?
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2
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64
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March 11, 2021
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Does kneaddata 0.7.4 still require the /1 and /2 in the read ids?
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6
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130
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February 24, 2021
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Is there a major difference between kneaddata version 0.7.4 and 0.7.10?
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1
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88
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February 17, 2021
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What happends with bowtie?
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0
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93
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January 21, 2021
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Kneaddata not decontaminating fully
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0
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79
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January 8, 2021
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