|
About the Kneaddata category
|
|
0
|
765
|
October 28, 2019
|
|
Kneaddata final pair output is 0
|
|
0
|
13
|
November 5, 2024
|
|
Invalid or corrupt jar file error from Trimmomatic
|
|
0
|
9
|
November 1, 2024
|
|
KneadData, starting with BAM files
|
|
0
|
4
|
October 24, 2024
|
|
Size of the paired Kneaddata output file is 0
|
|
3
|
35
|
October 23, 2024
|
|
All paired-end read unmatched
|
|
33
|
5424
|
October 23, 2024
|
|
Is there a way to look for kneaddata version without log file?
|
|
0
|
5
|
October 5, 2024
|
|
Problem with paired end demo on new install
|
|
15
|
2431
|
October 4, 2024
|
|
Kneaddata installed with conda is not available
|
|
9
|
2797
|
October 1, 2024
|
|
Kneaddata paired output have different names
|
|
0
|
12
|
September 19, 2024
|
|
Kneaddata fails with message: Killed
|
|
1
|
110
|
September 5, 2024
|
|
Adapters options
|
|
0
|
9
|
August 31, 2024
|
|
Kneaddata tossing roughly half of the reads at the trimmomatic step
|
|
0
|
12
|
August 29, 2024
|
|
Kneaddata unable to interpret sequencing header format
|
|
4
|
44
|
August 23, 2024
|
|
Paired End Run output explanation
|
|
1
|
27
|
August 22, 2024
|
|
Bowtie2 removed the entire reads from my fecal metagenomic data
|
|
2
|
44
|
August 10, 2024
|
|
Trimmomatic errors
|
|
2
|
36
|
August 2, 2024
|
|
Citation please
|
|
1
|
23
|
July 8, 2024
|
|
Processes and threads command difference in Kneaddata
|
|
0
|
29
|
July 1, 2024
|
|
Paired input to kneaddata resulting in unpaired files
|
|
1
|
317
|
June 29, 2024
|
|
Paired-end data results in unpaired output
|
|
27
|
5681
|
June 20, 2024
|
|
Empty paired files
|
|
0
|
51
|
June 6, 2024
|
|
Combined MTX/MGX analysis, contamination removal
|
|
0
|
56
|
May 28, 2024
|
|
Limit input file size when running kneaddata
|
|
0
|
53
|
May 20, 2024
|
|
Unable to download and install Kneaddata database
|
|
17
|
2713
|
April 2, 2024
|
|
Bug for TRF Download
|
|
1
|
130
|
May 8, 2024
|
|
KneadData critical error in bowtie2_discordant_pairs
|
|
12
|
1802
|
April 17, 2024
|
|
Kneaddata stringent bowtie2 filtering
|
|
0
|
127
|
April 3, 2024
|
|
`pip install kneaddata` doesn't install dependencies
|
|
2
|
571
|
April 2, 2024
|
|
Error with bowtie2: Saw ASCII character 10 but expected 33-based Phred qual
|
|
0
|
135
|
March 29, 2024
|