|
About the Kneaddata category
|
|
0
|
399
|
October 28, 2019
|
|
Kneaddata paired reads?
|
|
0
|
2
|
December 8, 2022
|
|
About TRF in kneaddata
|
|
5
|
333
|
December 8, 2022
|
|
Lost majority of the reads after kneadata
|
|
0
|
26
|
December 3, 2022
|
|
Paired end data showing error on --bypass-trim option
|
|
8
|
331
|
December 1, 2022
|
|
All paired-end read unmatched
|
|
12
|
747
|
December 1, 2022
|
|
Issue with KneadData database download
|
|
1
|
47
|
November 29, 2022
|
|
Kneaddata errors and output files
|
|
1
|
30
|
November 20, 2022
|
|
Kneaddata - a non very explicit error message
|
|
1
|
218
|
November 18, 2022
|
|
Long ugly file names of output files by Kneaddata
|
|
5
|
71
|
November 16, 2022
|
|
Metaphlan error after processing fastq using kneaddata v0.12.0
|
|
0
|
35
|
November 15, 2022
|
|
Custom database with multiple species
|
|
3
|
247
|
November 4, 2022
|
|
How can I expand the max amount of memory at running trimmomatic?
|
|
1
|
42
|
October 29, 2022
|
|
Choosing trim minimum length : would you share advice?
|
|
2
|
229
|
October 22, 2022
|
|
MINLEN question
|
|
12
|
1434
|
October 21, 2022
|
|
Strange output for kneaddata
|
|
3
|
443
|
October 17, 2022
|
|
Kneaddata installed with conda is not available
|
|
1
|
182
|
October 16, 2022
|
|
Errors reported by TRF or bowtie2 (set - t - p parameters)
|
|
0
|
68
|
October 7, 2022
|
|
`pip install kneaddata` doesn't install dependencies
|
|
1
|
156
|
September 30, 2022
|
|
KneadData critical error in bowtie2_discordant_pairs
|
|
4
|
571
|
September 21, 2022
|
|
Python error when running kneaddata
|
|
0
|
50
|
August 30, 2022
|
|
Which reference DB should I use?
|
|
0
|
131
|
July 4, 2022
|
|
Kneaddata in shell script
|
|
1
|
119
|
June 21, 2022
|
|
Feature request for kneaddata: add option to compress output fastq files
|
|
2
|
185
|
June 13, 2022
|
|
Kneaddata-Trimmomatic Permission Error
|
|
0
|
107
|
June 2, 2022
|
|
Options for paired input files
|
|
0
|
191
|
May 20, 2022
|
|
Kneaddata trf error
|
|
2
|
196
|
May 20, 2022
|
|
Kneaddata output
|
|
4
|
354
|
May 13, 2022
|
|
Dealing with paired-end shotgun metagenomics sequencing ran on two lanes
|
|
0
|
125
|
May 13, 2022
|
|
Kneaddata adds "#0/1" to barcode in the header
|
|
0
|
138
|
May 4, 2022
|