|
About the Kneaddata category
|
|
0
|
809
|
October 28, 2019
|
|
Is KneadData recommended for mouse fecal shotgun metagenomic samples?
|
|
2
|
16
|
December 17, 2025
|
|
KneadData — Need clarification on the exact input file names used at each internal step
|
|
1
|
35
|
November 7, 2025
|
|
Custom Adapter Sequence in Kneaddata
|
|
2
|
51
|
September 30, 2025
|
|
Kneaddata output as input for metaphlan
|
|
1
|
24
|
September 30, 2025
|
|
Kneaddata tar of human_genome uncompresses in subdirectory
|
|
2
|
50
|
June 25, 2025
|
|
Kneaddata Outputting Disordered Paired Reads
|
|
0
|
43
|
June 20, 2025
|
|
Bad id problem from bmtagger while running kneaddata v.0.7.10
|
|
3
|
2746
|
May 13, 2025
|
|
Kneaddata_database --download human_genome bowtie2
|
|
1
|
111
|
May 9, 2025
|
|
Unable to download and install Kneaddata database
|
|
21
|
3017
|
March 19, 2025
|
|
Empty paired files
|
|
3
|
141
|
March 14, 2025
|
|
Kneaddata - a non very explicit error message
|
|
4
|
1405
|
February 19, 2025
|
|
The output of KneadData differs when threads are used
|
|
3
|
103
|
February 6, 2025
|
|
There are small unmatched reads in paired reads of kneaddata result
|
|
1
|
82
|
January 14, 2025
|
|
The output of KneadData differs when threads are used
|
|
0
|
53
|
January 9, 2025
|
|
Citation please
|
|
2
|
168
|
December 31, 2024
|
|
All paired-end read unmatched
|
|
34
|
6020
|
December 25, 2024
|
|
Kneaddata final pair output is 0
|
|
1
|
86
|
December 25, 2024
|
|
Java error after new install
|
|
1
|
197
|
December 6, 2024
|
|
Do I have to remove overlapping reads from paire_end data before Metahplan?
|
|
0
|
23
|
November 27, 2024
|
|
Invalid or corrupt jar file error from Trimmomatic
|
|
0
|
62
|
November 1, 2024
|
|
KneadData, starting with BAM files
|
|
0
|
17
|
October 24, 2024
|
|
Size of the paired Kneaddata output file is 0
|
|
3
|
96
|
October 23, 2024
|
|
Is there a way to look for kneaddata version without log file?
|
|
0
|
13
|
October 5, 2024
|
|
Problem with paired end demo on new install
|
|
15
|
2522
|
October 4, 2024
|
|
Kneaddata installed with conda is not available
|
|
9
|
3023
|
October 1, 2024
|
|
Kneaddata paired output have different names
|
|
0
|
38
|
September 19, 2024
|
|
Kneaddata fails with message: Killed
|
|
1
|
161
|
September 5, 2024
|
|
Adapters options
|
|
0
|
30
|
August 31, 2024
|
|
Kneaddata tossing roughly half of the reads at the trimmomatic step
|
|
0
|
28
|
August 29, 2024
|