About the Kneaddata category
|
|
0
|
640
|
October 28, 2019
|
Paired-end data results in unpaired output
|
|
22
|
3551
|
December 1, 2023
|
ERROR: Unable to find trf
|
|
3
|
2395
|
November 27, 2023
|
KneadData critical error in bowtie2_discordant_pairs
|
|
10
|
1328
|
November 22, 2023
|
TRF: Total number of sequences with repeats removed from file
|
|
0
|
70
|
October 24, 2023
|
Single-end or Paired-end?
|
|
0
|
77
|
October 20, 2023
|
All paired-end read unmatched
|
|
23
|
3223
|
October 17, 2023
|
Updated kneaddata to fix issue with paired-end reads?
|
|
9
|
457
|
October 12, 2023
|
Kneaddata trf error
|
|
6
|
868
|
September 25, 2023
|
Kneaddata installed with conda is not available
|
|
6
|
1410
|
September 15, 2023
|
Problem with paired end demo on new install
|
|
13
|
2035
|
August 31, 2023
|
Kneaddata fail to recognize paired end data
|
|
2
|
142
|
August 30, 2023
|
Kneaddata_database hangs halfway through download
|
|
2
|
120
|
August 25, 2023
|
Kneaddata final pair1 : Total reads after merging results from multiple databases
|
|
0
|
108
|
August 22, 2023
|
Error in trimmomatic while running kneaddata
|
|
3
|
204
|
August 17, 2023
|
Error when using kneaddata from anaconda
|
|
0
|
129
|
August 11, 2023
|
Error when using --bypass-trim
|
|
0
|
127
|
August 11, 2023
|
What to do with unmatched paired-end reads from kneadata outputs?
|
|
1
|
178
|
August 3, 2023
|
Error in kneaddata
|
|
6
|
216
|
August 3, 2023
|
Kneaddata upaires reads
|
|
5
|
330
|
July 18, 2023
|
Feature request for kneaddata: add option to compress output fastq files
|
|
5
|
414
|
July 10, 2023
|
Different final reads after pre-processing with same code running twice
|
|
0
|
106
|
July 7, 2023
|
Error occurred during initialization of VM: Trimmomatic
|
|
1
|
155
|
July 7, 2023
|
How to continue to download database from where it was disrupted
|
|
2
|
149
|
June 28, 2023
|
About TRF in kneaddata
|
|
6
|
914
|
June 1, 2023
|
Bad id problem from bmtagger while running kneaddata v.0.7.10
|
|
2
|
2446
|
May 26, 2023
|
Lost majority of the reads after kneadata
|
|
1
|
414
|
May 24, 2023
|
Install KneadData in conda w/o Bowtie and Trimmomatic
|
|
0
|
219
|
May 11, 2023
|
Long ugly file names of output files by Kneaddata
|
|
7
|
429
|
April 1, 2023
|
Kneaddata- any options to checkpoint the runs and resume the runs
|
|
3
|
197
|
March 17, 2023
|