|
About the Kneaddata category
|
|
0
|
251
|
October 28, 2019
|
|
Problem with paired end demo on new install
|
|
5
|
797
|
November 26, 2021
|
|
Feature request for kneaddata: add option to compress output fastq files
|
|
1
|
18
|
November 19, 2021
|
|
Paired end data showing error on --bypass-trim option
|
|
5
|
40
|
November 10, 2021
|
|
KneadData critical error in bowtie2_discordant_pairs
|
|
1
|
69
|
November 8, 2021
|
|
Unable to download and install Kneaddata database
|
|
8
|
595
|
October 29, 2021
|
|
There are less reads survived after kneaddata
|
|
1
|
38
|
October 29, 2021
|
|
Asymmetric read QC using Trimmomatic?
|
|
2
|
52
|
September 25, 2021
|
|
Install instructions
|
|
1
|
56
|
September 24, 2021
|
|
Mouse transcriptome contaminant removal
|
|
2
|
47
|
August 27, 2021
|
|
"Unable to read file magic number" error
|
|
1
|
65
|
August 27, 2021
|
|
Removing human transcripts with polyA from RNA data
|
|
2
|
93
|
August 5, 2021
|
|
Unrecognized inputs
|
|
1
|
77
|
July 30, 2021
|
|
Paired-end data results in unpaired output
|
|
11
|
766
|
July 17, 2021
|
|
Trim Overrepresented Effect Downstream
|
|
1
|
89
|
July 9, 2021
|
|
Kneaddata outputs
|
|
1
|
125
|
July 9, 2021
|
|
Section Links Broken
|
|
1
|
56
|
July 9, 2021
|
|
Kneaddata_SILVA rRNA database error_link to database & direct downloads
|
|
15
|
176
|
June 24, 2021
|
|
Unknown bowtie2 errors
|
|
1
|
412
|
June 15, 2021
|
|
Kneaddata log file error
|
|
2
|
215
|
June 15, 2021
|
|
Kneaddata's version can not match
|
|
1
|
122
|
June 3, 2021
|
|
KneadData for dual-transcriptome RNA-seq data
|
|
1
|
171
|
June 3, 2021
|
|
Kneaddata Reformatting file sequence identifiers ... Type error
|
|
1
|
89
|
June 3, 2021
|
|
Discard read by minimum length
|
|
1
|
123
|
June 3, 2021
|
|
Adapter file isn't passed to trimmomatic when some trimmomatic options are specified
|
|
1
|
117
|
June 3, 2021
|
|
Kneaddata:Bowtie2 error: skipping reads
|
|
1
|
117
|
June 3, 2021
|
|
Warning in kneaddata.utilities, unable to remove file
|
|
4
|
256
|
May 28, 2021
|
|
Kneaddata 0.10 produces unordered pairs of reads
|
|
0
|
109
|
May 9, 2021
|
|
Kneaddata v0.10.0 - unrecognized arguments: --mode strict
|
|
6
|
235
|
May 3, 2021
|
|
Massive difference between paired reads' counts
|
|
1
|
125
|
May 1, 2021
|