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About the Kneaddata category
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0
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834
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October 28, 2019
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Impossible to set --max-memory for Trimmomatic
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7
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87
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August 21, 2026
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Adapter detection
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2
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58
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May 18, 2026
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Mismatched reads
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1
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25
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May 11, 2026
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Empty paired files
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6
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216
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March 2, 2026
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KneadData unmatched paired reads
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2
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68
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February 20, 2026
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Kneaddata Outputting Disordered Paired Reads
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1
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91
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February 5, 2026
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Is KneadData recommended for mouse fecal shotgun metagenomic samples?
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2
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84
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December 17, 2025
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KneadData — Need clarification on the exact input file names used at each internal step
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1
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77
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November 7, 2025
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Custom Adapter Sequence in Kneaddata
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2
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104
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September 30, 2025
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Kneaddata output as input for metaphlan
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1
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70
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September 30, 2025
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Kneaddata tar of human_genome uncompresses in subdirectory
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2
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83
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June 25, 2025
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Bad id problem from bmtagger while running kneaddata v.0.7.10
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3
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2776
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May 13, 2025
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Kneaddata_database --download human_genome bowtie2
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1
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216
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May 9, 2025
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Unable to download and install Kneaddata database
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21
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3169
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March 19, 2025
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Kneaddata - a non very explicit error message
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4
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1436
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February 19, 2025
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The output of KneadData differs when threads are used
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3
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154
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February 6, 2025
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There are small unmatched reads in paired reads of kneaddata result
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1
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114
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January 14, 2025
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The output of KneadData differs when threads are used
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0
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72
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January 9, 2025
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Citation please
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2
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355
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December 31, 2024
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Kneaddata final pair output is 0
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1
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116
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December 25, 2024
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All paired-end read unmatched
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34
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6287
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December 25, 2024
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Java error after new install
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1
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231
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December 6, 2024
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Do I have to remove overlapping reads from paire_end data before Metahplan?
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0
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32
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November 27, 2024
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Invalid or corrupt jar file error from Trimmomatic
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0
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85
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November 1, 2024
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KneadData, starting with BAM files
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0
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28
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October 24, 2024
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Size of the paired Kneaddata output file is 0
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3
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122
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October 23, 2024
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Is there a way to look for kneaddata version without log file?
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0
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18
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October 5, 2024
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Problem with paired end demo on new install
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15
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2587
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October 4, 2024
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Kneaddata installed with conda is not available
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9
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3136
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October 1, 2024
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