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About the Kneaddata category
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0
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776
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October 28, 2019
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Kneaddata - a non very explicit error message
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4
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1336
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February 19, 2025
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The output of KneadData differs when threads are used
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3
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30
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February 6, 2025
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There are small unmatched reads in paired reads of kneaddata result
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1
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29
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January 14, 2025
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Empty paired files
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2
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66
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January 10, 2025
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The output of KneadData differs when threads are used
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0
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21
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January 9, 2025
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Citation please
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2
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48
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December 31, 2024
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All paired-end read unmatched
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34
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5547
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December 25, 2024
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Kneaddata final pair output is 0
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1
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50
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December 25, 2024
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Java error after new install
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1
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167
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December 6, 2024
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Do I have to remove overlapping reads from paire_end data before Metahplan?
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0
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12
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November 27, 2024
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Invalid or corrupt jar file error from Trimmomatic
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0
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31
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November 1, 2024
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KneadData, starting with BAM files
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0
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8
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October 24, 2024
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Size of the paired Kneaddata output file is 0
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3
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53
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October 23, 2024
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Is there a way to look for kneaddata version without log file?
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0
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7
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October 5, 2024
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Problem with paired end demo on new install
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15
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2438
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October 4, 2024
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Kneaddata installed with conda is not available
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9
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2862
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October 1, 2024
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Kneaddata paired output have different names
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0
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20
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September 19, 2024
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Kneaddata fails with message: Killed
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1
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121
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September 5, 2024
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Adapters options
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0
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11
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August 31, 2024
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Kneaddata tossing roughly half of the reads at the trimmomatic step
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0
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19
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August 29, 2024
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Kneaddata unable to interpret sequencing header format
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4
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52
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August 23, 2024
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Paired End Run output explanation
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1
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39
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August 22, 2024
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Bowtie2 removed the entire reads from my fecal metagenomic data
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2
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58
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August 10, 2024
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Trimmomatic errors
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2
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55
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August 2, 2024
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Processes and threads command difference in Kneaddata
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0
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33
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July 1, 2024
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Paired input to kneaddata resulting in unpaired files
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1
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337
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June 29, 2024
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Paired-end data results in unpaired output
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27
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5733
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June 20, 2024
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Combined MTX/MGX analysis, contamination removal
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0
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58
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May 28, 2024
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Limit input file size when running kneaddata
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0
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53
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May 20, 2024
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