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Kneaddata installed with conda is not available
|
|
9
|
3142
|
October 1, 2024
|
|
Kneaddata paired output have different names
|
|
0
|
47
|
September 19, 2024
|
|
Kneaddata fails with message: Killed
|
|
1
|
191
|
September 5, 2024
|
|
Adapters options
|
|
0
|
47
|
August 31, 2024
|
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Kneaddata tossing roughly half of the reads at the trimmomatic step
|
|
0
|
40
|
August 29, 2024
|
|
Kneaddata unable to interpret sequencing header format
|
|
4
|
123
|
August 23, 2024
|
|
Paired End Run output explanation
|
|
1
|
98
|
August 22, 2024
|
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Bowtie2 removed the entire reads from my fecal metagenomic data
|
|
2
|
143
|
August 10, 2024
|
|
Trimmomatic errors
|
|
2
|
139
|
August 2, 2024
|
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Processes and threads command difference in Kneaddata
|
|
0
|
84
|
July 1, 2024
|
|
Paired input to kneaddata resulting in unpaired files
|
|
1
|
419
|
June 29, 2024
|
|
Paired-end data results in unpaired output
|
|
27
|
6248
|
June 20, 2024
|
|
Combined MTX/MGX analysis, contamination removal
|
|
0
|
81
|
May 28, 2024
|
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Limit input file size when running kneaddata
|
|
0
|
81
|
May 20, 2024
|
|
Bug for TRF Download
|
|
1
|
203
|
May 8, 2024
|
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KneadData critical error in bowtie2_discordant_pairs
|
|
12
|
1971
|
April 17, 2024
|
|
Kneaddata stringent bowtie2 filtering
|
|
0
|
152
|
April 3, 2024
|
|
`pip install kneaddata` doesn't install dependencies
|
|
2
|
624
|
April 2, 2024
|
|
Error with bowtie2: Saw ASCII character 10 but expected 33-based Phred qual
|
|
0
|
189
|
March 29, 2024
|
|
ERROR kneaddata output files
|
|
0
|
195
|
February 12, 2024
|
|
"Clarification on Trimommatic Default Parameters in Kneaddata: Understanding MINLEN Checks for 2x150 bp Data"
|
|
0
|
223
|
January 26, 2024
|
|
Find TRF version within KneadData
|
|
1
|
183
|
January 19, 2024
|
|
Error when using kneaddata from anaconda
|
|
2
|
410
|
January 2, 2024
|
|
ERROR: Unable to find trf
|
|
5
|
3490
|
December 26, 2023
|
|
About memory usage of Kneaddata
|
|
0
|
185
|
December 22, 2023
|
|
Kneaddata databases download issue
|
|
3
|
242
|
December 22, 2023
|
|
TRF: Total number of sequences with repeats removed from file
|
|
0
|
224
|
October 24, 2023
|
|
Single-end or Paired-end?
|
|
0
|
358
|
October 20, 2023
|
|
Updated kneaddata to fix issue with paired-end reads?
|
|
9
|
1655
|
October 12, 2023
|
|
Kneaddata trf error
|
|
6
|
1636
|
September 25, 2023
|