|
About the Infrastructure/Utilities category
|
|
2
|
672
|
May 15, 2020
|
|
Conda for biobakery_workflow for 4.0.0a1
|
|
0
|
2
|
April 22, 2025
|
|
Custom Adapter Sequence in Kneaddata
|
|
1
|
6
|
April 11, 2025
|
|
Issue with humann_regroup_table in biobakery_workflows wmgx
|
|
4
|
297
|
April 9, 2025
|
|
Unable to download and install Kneaddata database
|
|
21
|
2800
|
March 19, 2025
|
|
Empty paired files
|
|
3
|
78
|
March 14, 2025
|
|
Kneaddata - a non very explicit error message
|
|
4
|
1353
|
February 19, 2025
|
|
bioBakery workflows (wmgx) failing tasks
|
|
0
|
10
|
February 10, 2025
|
|
groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
|
|
7
|
834
|
February 6, 2025
|
|
Wmgx_wmgt ERROR: task 17
|
|
0
|
8
|
February 6, 2025
|
|
The output of KneadData differs when threads are used
|
|
3
|
43
|
February 6, 2025
|
|
Biobakery_workflows : Broken hand-off of handling fastq compression between Kneaddata and MetaPhlan
|
|
1
|
14
|
February 5, 2025
|
|
AttributeError: Can't pickle local object 'ArgumentParser.__init__.<locals>.identity'
|
|
1
|
11
|
January 22, 2025
|
|
There are small unmatched reads in paired reads of kneaddata result
|
|
1
|
42
|
January 14, 2025
|
|
Running biobakery wmgx with custom databases
|
|
0
|
17
|
January 7, 2025
|
|
The output of KneadData differs when threads are used
|
|
0
|
27
|
January 9, 2025
|
|
Citation please
|
|
2
|
55
|
December 31, 2024
|
|
All paired-end read unmatched
|
|
34
|
5591
|
December 25, 2024
|
|
Kneaddata final pair output is 0
|
|
1
|
54
|
December 25, 2024
|
|
Biobakery_workflow wmgx_vis not generating several plot (using toyset)
|
|
0
|
12
|
November 7, 2024
|
|
Java error after new install
|
|
1
|
172
|
December 6, 2024
|
|
Do I have to remove overlapping reads from paire_end data before Metahplan?
|
|
0
|
15
|
November 27, 2024
|
|
Graphlan error: Classes not implemented
|
|
4
|
47
|
November 25, 2024
|
|
Invalid or corrupt jar file error from Trimmomatic
|
|
0
|
36
|
November 1, 2024
|
|
KneadData, starting with BAM files
|
|
0
|
10
|
October 24, 2024
|
|
Size of the paired Kneaddata output file is 0
|
|
3
|
63
|
October 23, 2024
|
|
Is there a way to look for kneaddata version without log file?
|
|
0
|
8
|
October 5, 2024
|
|
Problem with paired end demo on new install
|
|
15
|
2440
|
October 4, 2024
|
|
Kneaddata installed with conda is not available
|
|
9
|
2877
|
October 1, 2024
|
|
Kneaddata paired output have different names
|
|
0
|
24
|
September 19, 2024
|