About the Infrastructure/Utilities category
|
|
2
|
454
|
May 15, 2020
|
Bad id problem from bmtagger while running kneaddata v.0.7.10
|
|
2
|
2105
|
May 26, 2023
|
Lost majority of the reads after kneadata
|
|
1
|
179
|
May 24, 2023
|
Paired-end data results in unpaired output
|
|
17
|
2295
|
May 19, 2023
|
Graphphlan label
|
|
2
|
321
|
May 16, 2023
|
ERROR: Unable to find trf
|
|
2
|
1853
|
January 5, 2022
|
Install KneadData in conda w/o Bowtie and Trimmomatic
|
|
0
|
44
|
May 11, 2023
|
ZeroDivisionError in GraPhlAn
|
|
0
|
37
|
May 4, 2023
|
Re-starting Halted Job (leveldb error)
|
|
3
|
72
|
April 18, 2023
|
Database usage error Workflows
|
|
1
|
64
|
April 14, 2023
|
Humann 3.0 error within biobakery_workflows wmgx
|
|
5
|
109
|
April 13, 2023
|
Manual Installation of kneaddata_db_human_genome
|
|
2
|
76
|
April 7, 2023
|
Long ugly file names of output files by Kneaddata
|
|
7
|
263
|
April 1, 2023
|
Biobakery_workflows using SGE hangs after kneaddata completes, gives error for each task
|
|
0
|
79
|
March 31, 2023
|
Issue with humann_regroup_table in biobakery_workflows wmgx
|
|
3
|
29
|
March 29, 2023
|
groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
|
|
3
|
401
|
March 29, 2023
|
Average abundance (z-score) Heatmap Visualization
|
|
0
|
46
|
March 27, 2023
|
Biobakery Workflow database
|
|
1
|
122
|
March 17, 2023
|
Cannot find the bioBakery AMI in Amazon EC2
|
|
2
|
184
|
March 17, 2023
|
Kneaddata- any options to checkpoint the runs and resume the runs
|
|
3
|
69
|
March 17, 2023
|
KneadData critical error in bowtie2_discordant_pairs
|
|
8
|
851
|
March 17, 2023
|
KneadData has error in bowtie2_discordant_pairs
|
|
0
|
52
|
March 11, 2023
|
Keaddata output is empty
|
|
0
|
96
|
March 3, 2023
|
Biobakery workflows with metaphlan4 and humann3
|
|
1
|
132
|
March 3, 2023
|
Processing multiple files
|
|
3
|
78
|
March 2, 2023
|
Paired end data showing error on --bypass-trim option
|
|
12
|
544
|
February 28, 2023
|
Save SAM outputs files
|
|
0
|
63
|
February 20, 2023
|
Cannot install GraPhlAn
|
|
2
|
138
|
February 14, 2023
|
Interpreting read_count_table Numbers?
|
|
0
|
59
|
February 9, 2023
|
Questions about the read count table pulled from kneaddata logs
|
|
1
|
141
|
February 8, 2023
|