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About the Infrastructure/Utilities category
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2
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667
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May 15, 2020
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Kneaddata - a non very explicit error message
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4
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1336
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February 19, 2025
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bioBakery workflows (wmgx) failing tasks
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0
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5
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February 10, 2025
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groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
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7
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829
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February 6, 2025
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Wmgx_wmgt ERROR: task 17
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0
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6
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February 6, 2025
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The output of KneadData differs when threads are used
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3
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30
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February 6, 2025
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Biobakery_workflows : Broken hand-off of handling fastq compression between Kneaddata and MetaPhlan
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1
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5
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February 5, 2025
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AttributeError: Can't pickle local object 'ArgumentParser.__init__.<locals>.identity'
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1
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6
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January 22, 2025
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There are small unmatched reads in paired reads of kneaddata result
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1
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29
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January 14, 2025
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Empty paired files
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2
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66
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January 10, 2025
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Running biobakery wmgx with custom databases
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0
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12
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January 7, 2025
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The output of KneadData differs when threads are used
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0
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21
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January 9, 2025
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Citation please
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2
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48
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December 31, 2024
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All paired-end read unmatched
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34
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5547
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December 25, 2024
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Kneaddata final pair output is 0
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1
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50
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December 25, 2024
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Biobakery_workflow wmgx_vis not generating several plot (using toyset)
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0
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12
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November 7, 2024
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Java error after new install
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1
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167
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December 6, 2024
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Do I have to remove overlapping reads from paire_end data before Metahplan?
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0
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12
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November 27, 2024
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Graphlan error: Classes not implemented
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4
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37
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November 25, 2024
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Invalid or corrupt jar file error from Trimmomatic
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0
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31
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November 1, 2024
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KneadData, starting with BAM files
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0
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8
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October 24, 2024
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Size of the paired Kneaddata output file is 0
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3
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53
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October 23, 2024
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Is there a way to look for kneaddata version without log file?
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0
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7
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October 5, 2024
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Problem with paired end demo on new install
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15
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2438
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October 4, 2024
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Kneaddata installed with conda is not available
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9
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2862
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October 1, 2024
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Kneaddata paired output have different names
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0
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20
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September 19, 2024
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Kneaddata fails with message: Killed
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1
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121
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September 5, 2024
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Biobakery workflows Strainphlan
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1
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37
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September 5, 2024
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Adapters options
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0
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11
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August 31, 2024
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Biobakery_workflows using SGE hangs after kneaddata completes, gives error for each task
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1
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319
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August 30, 2024
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