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About the Infrastructure/Utilities category
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2
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710
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May 15, 2020
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Impossible to set --max-memory for Trimmomatic
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6
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71
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July 17, 2026
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Versions of datasets which are compatible with the latest docker image
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0
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19
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May 26, 2026
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Biobakery_workflows v4.0.0a1 uses deprecated HUMAnN UniRef build name (uniref90_diamond)
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0
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28
|
May 24, 2026
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Adapter detection
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2
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57
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May 18, 2026
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Mismatched reads
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1
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22
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May 11, 2026
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bioBakery Database Download Failure (wmgx)
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0
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26
|
May 6, 2026
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Empty paired files
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6
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209
|
March 2, 2026
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Get_counts_from_humann_logs.py crashes with ValueError when MetaPhlAn 3.0.13 emits [WARNING] lines into HUMAnN log (biobakery_workflows 3.1)
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0
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30
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February 25, 2026
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Biobakery Workflow database
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4
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906
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February 24, 2026
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KneadData unmatched paired reads
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2
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66
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February 20, 2026
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Kneaddata Outputting Disordered Paired Reads
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1
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86
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February 5, 2026
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Biobakery wmgx_wmtx
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0
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40
|
December 19, 2025
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Is KneadData recommended for mouse fecal shotgun metagenomic samples?
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2
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84
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December 17, 2025
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KneadData — Need clarification on the exact input file names used at each internal step
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1
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75
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November 7, 2025
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Biobakery workflows MetaPhlAn4 stucked
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0
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40
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October 27, 2025
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Can't install MelonnPan -- AssocTests no longer available
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5
|
152
|
October 15, 2025
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Access to Biobakery Galaxy unavailable
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0
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36
|
October 7, 2025
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Grid Jobs Benchmarking
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0
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20
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October 3, 2025
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Custom Adapter Sequence in Kneaddata
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2
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98
|
September 30, 2025
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Kneaddata output as input for metaphlan
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1
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67
|
September 30, 2025
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Bowtie-2-build indexing fails
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0
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44
|
September 1, 2025
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Is there an environment .yaml file for biobakery workflow?
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1
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34
|
August 8, 2025
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Trouble installing MelonnPan
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1
|
33
|
July 18, 2025
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Kneaddata tar of human_genome uncompresses in subdirectory
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2
|
80
|
June 25, 2025
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Mamba installation
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1
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216
|
June 11, 2025
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Bad id problem from bmtagger while running kneaddata v.0.7.10
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3
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2776
|
May 13, 2025
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General Questions: Visualization
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0
|
36
|
May 12, 2025
|
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Kneaddata_database --download human_genome bowtie2
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|
1
|
213
|
May 9, 2025
|
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Conda for biobakery_workflow for 4.0.0a1
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|
1
|
98
|
May 9, 2025
|