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About the Infrastructure/Utilities category
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2
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410
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May 15, 2020
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Humann 3.0 error within biobakery_workflows wmgx
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3
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16
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March 29, 2023
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Issue with humann_regroup_table in biobakery_workflows wmgx
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3
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4
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March 29, 2023
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groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
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3
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357
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March 29, 2023
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Average abundance (z-score) Heatmap Visualization
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0
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7
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March 27, 2023
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Biobakery Workflow database
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1
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41
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March 17, 2023
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Cannot find the bioBakery AMI in Amazon EC2
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2
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128
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March 17, 2023
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Re-starting Halted Job (leveldb error)
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1
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29
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March 17, 2023
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Kneaddata- any options to checkpoint the runs and resume the runs
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3
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24
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March 17, 2023
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KneadData critical error in bowtie2_discordant_pairs
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8
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724
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March 17, 2023
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KneadData has error in bowtie2_discordant_pairs
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0
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27
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March 11, 2023
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Keaddata output is empty
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0
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33
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March 3, 2023
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Biobakery workflows with metaphlan4 and humann3
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1
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70
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March 3, 2023
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Processing multiple files
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3
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38
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March 2, 2023
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Paired-end data results in unpaired output
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16
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2055
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February 28, 2023
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Paired end data showing error on --bypass-trim option
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12
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469
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February 28, 2023
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Save SAM outputs files
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0
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33
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February 20, 2023
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Cannot install GraPhlAn
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2
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58
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February 14, 2023
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Interpreting read_count_table Numbers?
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0
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27
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February 9, 2023
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Questions about the read count table pulled from kneaddata logs
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1
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76
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February 8, 2023
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Deletion of data / Secondary use of data
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1
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27
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February 3, 2023
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Kneaddata - a non very explicit error message
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3
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405
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February 2, 2023
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Long ugly file names of output files by Kneaddata
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6
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156
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February 2, 2023
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Kneaddata installed with conda is not available
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3
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451
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February 1, 2023
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There are less reads survived after kneaddata
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5
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474
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January 23, 2023
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Update to the latest version of biobakery_workflows
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0
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48
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January 18, 2023
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Total reads after trimming is the SAME as Initial number of reads
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0
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42
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January 5, 2023
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Err: ERROR: Unable to find trf. Please provide the full path to trf with --trf
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0
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50
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January 5, 2023
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Kneaddata upaires reads
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2
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61
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January 4, 2023
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HUMAnN conda installation dependency issues
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1
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144
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December 22, 2022
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