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Kneaddata_database --download human_genome bowtie2
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1
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222
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May 9, 2025
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Conda for biobakery_workflow for 4.0.0a1
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1
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104
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May 9, 2025
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Annotation with phyla data
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0
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34
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May 8, 2025
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Issue with humann_regroup_table in biobakery_workflows wmgx
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4
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358
|
April 9, 2025
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Unable to download and install Kneaddata database
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21
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3188
|
March 19, 2025
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Kneaddata - a non very explicit error message
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4
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1439
|
February 19, 2025
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bioBakery workflows (wmgx) failing tasks
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0
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75
|
February 10, 2025
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groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
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7
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950
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February 6, 2025
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Wmgx_wmgt ERROR: task 17
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0
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36
|
February 6, 2025
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The output of KneadData differs when threads are used
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3
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158
|
February 6, 2025
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Biobakery_workflows : Broken hand-off of handling fastq compression between Kneaddata and MetaPhlan
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1
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67
|
February 5, 2025
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AttributeError: Can't pickle local object 'ArgumentParser.__init__.<locals>.identity'
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1
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114
|
January 22, 2025
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There are small unmatched reads in paired reads of kneaddata result
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1
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118
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January 14, 2025
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Running biobakery wmgx with custom databases
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0
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57
|
January 7, 2025
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The output of KneadData differs when threads are used
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0
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72
|
January 9, 2025
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Citation please
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2
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378
|
December 31, 2024
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Kneaddata final pair output is 0
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1
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121
|
December 25, 2024
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All paired-end read unmatched
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34
|
6302
|
December 25, 2024
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Biobakery_workflow wmgx_vis not generating several plot (using toyset)
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0
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34
|
November 7, 2024
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Java error after new install
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1
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232
|
December 6, 2024
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Do I have to remove overlapping reads from paire_end data before Metahplan?
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0
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35
|
November 27, 2024
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Graphlan error: Classes not implemented
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4
|
108
|
November 25, 2024
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Invalid or corrupt jar file error from Trimmomatic
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0
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87
|
November 1, 2024
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KneadData, starting with BAM files
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0
|
29
|
October 24, 2024
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Size of the paired Kneaddata output file is 0
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3
|
126
|
October 23, 2024
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Is there a way to look for kneaddata version without log file?
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0
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18
|
October 5, 2024
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Problem with paired end demo on new install
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15
|
2590
|
October 4, 2024
|
|
Kneaddata installed with conda is not available
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9
|
3137
|
October 1, 2024
|
|
Kneaddata paired output have different names
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0
|
47
|
September 19, 2024
|
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Kneaddata fails with message: Killed
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|
1
|
189
|
September 5, 2024
|