|
About the bioBakery workflows category
|
|
0
|
574
|
October 29, 2019
|
|
Versions of datasets which are compatible with the latest docker image
|
|
0
|
7
|
May 26, 2026
|
|
Biobakery_workflows v4.0.0a1 uses deprecated HUMAnN UniRef build name (uniref90_diamond)
|
|
0
|
7
|
May 24, 2026
|
|
bioBakery Database Download Failure (wmgx)
|
|
0
|
13
|
May 6, 2026
|
|
Get_counts_from_humann_logs.py crashes with ValueError when MetaPhlAn 3.0.13 emits [WARNING] lines into HUMAnN log (biobakery_workflows 3.1)
|
|
0
|
18
|
February 25, 2026
|
|
Biobakery Workflow database
|
|
4
|
867
|
February 24, 2026
|
|
Biobakery wmgx_wmtx
|
|
0
|
31
|
December 19, 2025
|
|
Biobakery workflows MetaPhlAn4 stucked
|
|
0
|
34
|
October 27, 2025
|
|
Access to Biobakery Galaxy unavailable
|
|
0
|
28
|
October 7, 2025
|
|
Grid Jobs Benchmarking
|
|
0
|
14
|
October 3, 2025
|
|
Bowtie-2-build indexing fails
|
|
0
|
33
|
September 1, 2025
|
|
Mamba installation
|
|
1
|
201
|
June 11, 2025
|
|
General Questions: Visualization
|
|
0
|
24
|
May 12, 2025
|
|
Conda for biobakery_workflow for 4.0.0a1
|
|
1
|
89
|
May 9, 2025
|
|
Issue with humann_regroup_table in biobakery_workflows wmgx
|
|
4
|
341
|
April 9, 2025
|
|
bioBakery workflows (wmgx) failing tasks
|
|
0
|
58
|
February 10, 2025
|
|
groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
|
|
7
|
906
|
February 6, 2025
|
|
Wmgx_wmgt ERROR: task 17
|
|
0
|
30
|
February 6, 2025
|
|
Biobakery_workflows : Broken hand-off of handling fastq compression between Kneaddata and MetaPhlan
|
|
1
|
49
|
February 5, 2025
|
|
AttributeError: Can't pickle local object 'ArgumentParser.__init__.<locals>.identity'
|
|
1
|
100
|
January 22, 2025
|
|
Running biobakery wmgx with custom databases
|
|
0
|
46
|
January 7, 2025
|
|
Biobakery_workflow wmgx_vis not generating several plot (using toyset)
|
|
0
|
25
|
November 7, 2024
|
|
Biobakery workflows Strainphlan
|
|
1
|
84
|
September 5, 2024
|
|
Metaphlan sequence identification
|
|
0
|
13
|
August 13, 2024
|
|
Biobakery_workflows wmgx ValueError: could not convert string to float: '8.355B'
|
|
0
|
85
|
May 22, 2024
|
|
MTX Model IBD Data Processing Pipeline
|
|
1
|
50
|
July 26, 2024
|
|
Taxonomic-profiling-options with more than one option
|
|
0
|
48
|
June 27, 2024
|
|
MTX Model Coefficient to Log Fold Change
|
|
0
|
85
|
June 10, 2024
|
|
Metatranscriptomic pre-processing
|
|
3
|
351
|
June 13, 2024
|
|
Biobakery workflows computational speed
|
|
8
|
884
|
June 12, 2024
|