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About the bioBakery workflows category
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0
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580
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October 29, 2019
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Versions of datasets which are compatible with the latest docker image
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0
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18
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May 26, 2026
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Biobakery_workflows v4.0.0a1 uses deprecated HUMAnN UniRef build name (uniref90_diamond)
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0
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28
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May 24, 2026
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bioBakery Database Download Failure (wmgx)
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0
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26
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May 6, 2026
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Get_counts_from_humann_logs.py crashes with ValueError when MetaPhlAn 3.0.13 emits [WARNING] lines into HUMAnN log (biobakery_workflows 3.1)
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0
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30
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February 25, 2026
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Biobakery Workflow database
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4
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899
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February 24, 2026
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Biobakery wmgx_wmtx
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0
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40
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December 19, 2025
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Biobakery workflows MetaPhlAn4 stucked
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0
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40
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October 27, 2025
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Access to Biobakery Galaxy unavailable
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0
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36
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October 7, 2025
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Grid Jobs Benchmarking
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0
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20
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October 3, 2025
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Bowtie-2-build indexing fails
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0
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43
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September 1, 2025
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Mamba installation
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1
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216
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June 11, 2025
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General Questions: Visualization
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0
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34
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May 12, 2025
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Conda for biobakery_workflow for 4.0.0a1
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1
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97
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May 9, 2025
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Issue with humann_regroup_table in biobakery_workflows wmgx
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4
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354
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April 9, 2025
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bioBakery workflows (wmgx) failing tasks
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0
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72
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February 10, 2025
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groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
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7
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937
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February 6, 2025
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Wmgx_wmgt ERROR: task 17
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0
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35
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February 6, 2025
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Biobakery_workflows : Broken hand-off of handling fastq compression between Kneaddata and MetaPhlan
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1
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63
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February 5, 2025
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AttributeError: Can't pickle local object 'ArgumentParser.__init__.<locals>.identity'
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1
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110
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January 22, 2025
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Running biobakery wmgx with custom databases
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0
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52
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January 7, 2025
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Biobakery_workflow wmgx_vis not generating several plot (using toyset)
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0
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30
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November 7, 2024
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Biobakery workflows Strainphlan
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1
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102
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September 5, 2024
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Metaphlan sequence identification
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0
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17
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August 13, 2024
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Biobakery_workflows wmgx ValueError: could not convert string to float: '8.355B'
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0
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92
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May 22, 2024
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MTX Model IBD Data Processing Pipeline
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1
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58
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July 26, 2024
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Taxonomic-profiling-options with more than one option
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0
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52
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June 27, 2024
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MTX Model Coefficient to Log Fold Change
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0
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92
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June 10, 2024
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Metatranscriptomic pre-processing
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3
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365
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June 13, 2024
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Biobakery workflows computational speed
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8
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904
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June 12, 2024
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