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About the Downstream analysis and statistics category
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0
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213
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November 12, 2019
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How to add covariates for LEfSe analysis
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1
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9
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July 28, 2021
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Does Maaslin2 supports longitudinal data analysis?
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1
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6
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July 28, 2021
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Reference values for a categorical fixed effect variable
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20
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593
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July 28, 2021
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Lefse comparing subjects not groups
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1
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13
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July 27, 2021
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Maaslin2 handling of covariates
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2
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54
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July 26, 2021
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Recommended Test for Large Variability
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1
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42
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July 21, 2021
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HUMAnN and MaAsLin Analysis Vignette
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2
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79
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July 20, 2021
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Multiple comparison correcting
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7
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1114
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July 19, 2021
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Interpreting LEfSe Galaxy output
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2
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37
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July 19, 2021
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Issues with LEfSe Galaxy platform
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3
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37
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July 19, 2021
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Pairwise comparisons
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0
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30
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July 19, 2021
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Problem with LEfSe first step
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4
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28
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July 16, 2021
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Input_data and input_metadata Specifications
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1
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43
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July 15, 2021
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Formula in MaAsLin2 heatmap output
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2
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83
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July 13, 2021
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Using Maaslin2 with centered log ratio transformation
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2
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43
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July 12, 2021
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Lefse-plot_res.py --> Traceback (most recent call last)
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2
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39
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July 9, 2021
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No differentially abundant features found in tax-otu-table-result.txt. although a number of significantly discriminative features is veryfied
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2
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35
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July 9, 2021
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Label only top features on Cladogram
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1
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28
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June 29, 2021
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Problme with LEfSe using command line interface
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4
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75
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June 24, 2021
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Error in fit_adjust_batch script in the MMUPHin package
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3
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29
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June 17, 2021
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Error in Maaslin2(input_data = input_data, input_metadata = input_metadata, : Please provide the reference for the variable 'diagnosis' which includes more than 2 levels: UC, CD, nonIBD
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3
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146
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June 11, 2021
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Problem with LEFSe in Galaxy
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10
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510
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June 10, 2021
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Issue while calculating LDA effect size
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1
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50
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June 10, 2021
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LEfSe cladogram problem
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3
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92
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June 4, 2021
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What does the size of the dot/small circles indicate in the cladograms?
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3
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51
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June 4, 2021
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Different result from lefse at genus level when used metaphlan output profile upto genus and species level
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4
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206
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June 4, 2021
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Redundant taxa in LEfSE output
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1
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67
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June 4, 2021
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I can't run lefse tutorial example
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1
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66
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June 4, 2021
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Galaxy server not working, unable to download LefSe module
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1
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55
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June 4, 2021
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