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About the Downstream analysis and statistics category
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0
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916
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November 12, 2019
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MaAsLin2: Comparing one value to multiple values simultaneously
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2
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21
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July 15, 2026
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Maaslin3 issue error message
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12
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256
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July 15, 2026
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normalization = "TSS" vs "NONE" for pre-filtered relative abundance data
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2
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16
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July 12, 2026
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MaAsLin3 for metagenomic counts - appropriate normalization settings?
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2
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25
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July 8, 2026
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MaAsLin3, summary plots not generating but association plots are
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3
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23
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July 2, 2026
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HUMAnN 4 outputs and best practices for paired designs
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3
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39
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June 25, 2026
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Error running MTX model 3.0 tutorial
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2
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23
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June 24, 2026
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Pseudocounts for compatibility with ordination
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2
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24
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June 18, 2026
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best strategy for analyzing functional changes over time
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1
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47
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June 5, 2026
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Longitudinal analysis using Maaslin3
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9
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114
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June 5, 2026
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Error running MaAsLin3 for genus level data only
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1
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20
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June 3, 2026
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Troubles with xtfrm.data.frame
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7
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42
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June 1, 2026
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Question regarding normalization method for rarefied 16S ASV data ("TSS" vs "NONE")
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1
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29
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May 27, 2026
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Reliability of MaAsLin3 with small sample sizes
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1
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61
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May 11, 2026
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Reference level changes lead to different pairwise differential abundance results in Maaslin3
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1
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25
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May 11, 2026
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Maaslin 3 package versioning
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2
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52
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May 7, 2026
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Pairwise comparisons for interaction terms in maaslin3
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10
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499
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May 6, 2026
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Maaslin3 model runs but produce output with no results
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9
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166
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May 6, 2026
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Inverting reference
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6
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42
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May 4, 2026
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Selecting covariates - MaAsLin2 DA
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1
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22
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April 27, 2026
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Error in Maaslin3 "NROW(value) must match nrow(x)"
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2
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28
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April 24, 2026
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Lefse format data error
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6
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52
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April 22, 2026
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How do I interpret Maaslin3 summary plot
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1
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27
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April 21, 2026
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Job killed when setting multiple cores running on hpc server
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2
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92
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April 16, 2026
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R studio freezing when opening the Maaslin2 analysis tab
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3
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22
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April 14, 2026
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Transformation or GLM + link function?
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2
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26
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April 10, 2026
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Including host phylogeny as random effect
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1
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25
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April 8, 2026
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Tracking Microbiome Changes Linked to Disease Onset—Can MaAsLin Do This?
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1
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31
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April 6, 2026
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Group comparison per timepoint in a longitudinal study
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5
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85
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March 23, 2026
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