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About the Downstream analysis and statistics category
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0
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196
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November 12, 2019
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Problme with LEfSe using command line interface
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4
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18
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June 24, 2021
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Picrust2 - reference database issue
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0
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2
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June 22, 2021
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Error in fit_adjust_batch script in the MMUPHin package
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3
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12
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June 17, 2021
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Error in Maaslin2(input_data = input_data, input_metadata = input_metadata, : Please provide the reference for the variable 'diagnosis' which includes more than 2 levels: UC, CD, nonIBD
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3
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92
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June 11, 2021
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Problem with LEFSe in Galaxy
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10
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461
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June 10, 2021
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Issue while calculating LDA effect size
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1
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24
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June 10, 2021
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Formula in MaAsLin2 heatmap output
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0
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40
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June 8, 2021
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LEfSe cladogram problem
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3
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55
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June 4, 2021
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What does the size of the dot/small circles indicate in the cladograms?
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3
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37
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June 4, 2021
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Different result from lefse at genus level when used metaphlan output profile upto genus and species level
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4
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189
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June 4, 2021
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Redundant taxa in LEfSE output
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1
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43
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June 4, 2021
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I can't run lefse tutorial example
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1
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41
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June 4, 2021
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Galaxy server not working, unable to download LefSe module
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1
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37
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June 4, 2021
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Galaxy problems: MaAsLin
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2
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41
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June 4, 2021
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Publication for sparseDOSSA
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1
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48
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June 3, 2021
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Pairwise comparisons and multiple comparisons corrections
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1
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37
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June 3, 2021
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Format_input.py error in docker
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1
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50
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June 3, 2021
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Compatibility of Humann2 Output Files for Maaslin2
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11
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889
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May 28, 2021
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403 Forbidden error for galaxy
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2
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52
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May 26, 2021
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How to define the transformation / the normalization to use in Maaslin2
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4
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86
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May 26, 2021
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How to interprete Maaslin output?
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3
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76
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May 23, 2021
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Formatting maaslin plots and heatmap
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1
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42
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May 21, 2021
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Choosing analysis method for maaslin2
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4
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75
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May 21, 2021
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Adjust alpha diversity using covariates as fixed effect in Maaslin2
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8
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72
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May 19, 2021
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Lefse data and results
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1
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66
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May 14, 2021
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If I set the LDA score below the default value of 2.0, is it still statistically reliable?
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1
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51
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May 14, 2021
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LDA Effect Size Error
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1
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67
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May 14, 2021
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Lefse for Temporal comparitive analysis
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1
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49
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May 14, 2021
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Longitudinal study and correcting for cage effect
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2
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53
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May 14, 2021
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