About the Downstream analysis and statistics category
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0
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821
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November 12, 2019
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Installing Maaslin2 from Bioconductor
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3
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765
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December 8, 2024
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LEfSe issues and errors
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35
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4468
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December 5, 2024
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Maaslin2 (v1.12.0) issue with metadata catagories
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2
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12
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November 28, 2024
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Print all groups that satisfy the p-value cutoff in .res file (not just top lda group)
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0
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4
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November 27, 2024
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MaAsLin3 _ NA in heatmap plot
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1
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15
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November 27, 2024
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Using Maaslin2 for "effect removal"
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1
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22
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November 26, 2024
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MaAslin2 result differs from original expr and subsetted expr
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1
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16
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November 26, 2024
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Maaslin3 undefined columns selected
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2
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34
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November 26, 2024
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Different results with LEfSe on between Galaxy and Conda
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3
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276
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November 18, 2024
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Exporting Results/LDA scores to .tsv with conda?
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3
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195
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November 18, 2024
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Lefse_bug LDA run had a bug
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2
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121
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November 12, 2024
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How to use coef_plot_vars?
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1
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19
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November 11, 2024
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Different results with random effect from Maaslin2 vs Maaslin3
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8
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90
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November 11, 2024
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Heatmap_first_n has no effect on output heatmap
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2
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21
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November 11, 2024
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Median_comparison_abundance: should it be TRUE or FALSE?
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1
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7
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November 11, 2024
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Bug in filtering by variance
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1
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18
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November 11, 2024
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Interaction term missing from Maaslin2 output
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1
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151
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November 1, 2024
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Shannon diversity: not normally distributed
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1
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82
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November 1, 2024
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The issue of comparing results after recalculating q-values in Maaslin2
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1
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73
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November 1, 2024
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Maaslin2 does not retrieve any figure nor significant result
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2
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23
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October 30, 2024
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Maaslin2 fails with random effects
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3
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50
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October 28, 2024
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R Session aborts when running Maaslin2
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1
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12
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October 21, 2024
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Does Maaslin2 support taxa as explanatory/independent variables?
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4
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28
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October 21, 2024
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MetaPhlAn3 output analysis with MaAsLin2
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2
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60
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September 25, 2024
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Error in when running lefse on Galaxy in step B (LDA effect size)
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0
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51
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September 11, 2024
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Number of figures in output
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1
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31
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September 10, 2024
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Extract processed data from MaAsLin2
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4
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581
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September 6, 2024
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Controlling for nested matched controls
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1
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33
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September 3, 2024
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Question about a strange result
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2
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49
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August 21, 2024
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