About the Downstream analysis and statistics category
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0
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509
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November 12, 2019
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Filtering of features by abundance
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4
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1181
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May 26, 2023
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Formula to test multiple variables
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3
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31
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May 26, 2023
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The way microorganisms are named affect the final results of lefse
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7
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372
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May 25, 2023
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Problme with LEfSe using command line interface
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5
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1139
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May 25, 2023
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Error in adjust_batch: Feature table must be non-negative for normalization!
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5
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48
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May 24, 2023
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I can't see why I am getting this error in lefse in conda?
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5
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748
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May 24, 2023
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Lefse from OTU table
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0
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19
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May 23, 2023
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Xtfrm error with Maaslin2 default example in R
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9
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108
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May 18, 2023
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MaAsLin 2 for longitudinal analysis with different individuals
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3
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23
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May 18, 2023
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Empty all_results.tsv files
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4
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23
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May 17, 2023
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"Please provide the reference for the variable" error when running Maaslin2
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1
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34
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May 12, 2023
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LefSE not available on new biobakery website?
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1
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77
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May 12, 2023
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Cannot run Maaslin2 due to lpsymphony errors
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1
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68
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May 8, 2023
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Quiet parameter for Maaslin2()
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5
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77
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May 2, 2023
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High rates of significant results using NEGBIN
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3
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78
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April 27, 2023
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Generating lefse cladogram
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3
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152
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April 25, 2023
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Error in run_lefse.py
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1
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120
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April 24, 2023
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What does it mean negative LDA scores?
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2
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1320
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April 22, 2023
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Settings when analyzing functional abundances
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3
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72
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April 21, 2023
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Differential abundance analysis of genes and pathways in metagenomics
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1
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84
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April 13, 2023
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Maaslin2 taxonomic hierarchy analysis
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1
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130
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April 6, 2023
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How to treat the confounders when associating rumen microbiome and methane emission
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1
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74
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April 4, 2023
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Format Data for LefSe no working
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0
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85
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April 2, 2023
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Failled Data upload
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4
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117
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April 1, 2023
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Error Received- Failed: Please make sure the file is available. (500)
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11
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449
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April 1, 2023
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Failed Data Upload
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4
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173
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April 1, 2023
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The label in Cladogram is not centered
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0
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57
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March 30, 2023
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Maaslin2 significant results
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7
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680
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March 22, 2023
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Trying to understand coef column (and how to convert it to fold change)
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13
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1123
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March 17, 2023
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