So I have run my analysis with MetaPhlan 4 which uses this version mpa_vOct22_CHOCOPhlAnSGB_202403_species , now I want to compare my results with another study which was run with mpa_v30_CHOCOPhlAn_201901_species_tree, which I know is based on NCBI texa. So I was just wondering if there is a SGB file for MetaPhlAn 3 so that I can match it with 4th version or a GCA annotation tree file for MetaPhlAn4 , because I know that they have the SGB IDs in place of the GCA ids as was the case with previous v30 file.
I have come across Index of /databases/PhyloPhlAn this where SGB.Jan21.txt.bz2 , which has both GCA and SGB annotations , but I am a bit hesitant in using it… it would be really helpful if somebody can shed some light in this problem.