Hi all, Can you please suggest a method to download all the SGB genomes used to construct the metaphlan4 database? If I understand correctly, the links on the Segata Lab website (Segata Lab - Computational Metagenomics) only contain a subset of the SGB genomes used, but not all of them.
I was considering using the dataset download tool available on NCBI to download the genomes via accession ids (provided in the supplementary table) but is there an easier/faster way? Thanks.