|
About the Lefse category
|
|
0
|
2293
|
October 28, 2019
|
|
LEfSe issues and errors
|
|
39
|
4673
|
March 13, 2025
|
|
Need Help with Galaxy LEfSe LDA Step Error
|
|
1
|
30
|
February 27, 2025
|
|
How to include other subclades/taxa in the resulting plot?
|
|
1
|
30
|
February 18, 2025
|
|
Print all groups that satisfy the p-value cutoff in .res file (not just top lda group)
|
|
0
|
10
|
November 27, 2024
|
|
Different results with LEfSe on between Galaxy and Conda
|
|
3
|
298
|
November 18, 2024
|
|
Exporting Results/LDA scores to .tsv with conda?
|
|
3
|
207
|
November 18, 2024
|
|
Lefse_bug LDA run had a bug
|
|
2
|
134
|
November 12, 2024
|
|
Error in when running lefse on Galaxy in step B (LDA effect size)
|
|
0
|
63
|
September 11, 2024
|
|
Number of significantly discriminative features: 311 ( 311 ) before internal wilcoxon
|
|
0
|
60
|
August 14, 2024
|
|
Number of significantly discriminative features: 8 ( 131 ) before internal wilcoxon
|
|
1
|
118
|
August 13, 2024
|
|
Lefse problem with plotting
|
|
1
|
351
|
July 24, 2024
|
|
Lefse error :- No differentially abundant features
|
|
0
|
47
|
July 24, 2024
|
|
rpy2.rinterface.RRuntimeError
|
|
0
|
37
|
July 23, 2024
|
|
Lefse installation
|
|
2
|
168
|
July 18, 2024
|
|
LEfSe for humann3
|
|
2
|
177
|
June 5, 2024
|
|
TypeError: slice indices must be integers or None or have an __index__ method
|
|
1
|
147
|
May 30, 2024
|
|
Problem using LEfSe on Galaxy - can't format data for LEfSe
|
|
7
|
2122
|
May 3, 2024
|
|
LEfSe downstream processing issue: LDA tool not showing any difference between the classes
|
|
0
|
98
|
April 26, 2024
|
|
Unable to access the Galaxy module of lefse
|
|
34
|
3959
|
April 17, 2024
|
|
Tutorial: AttributeError: 'NoneType' object has no attribute 'rownames'AttributeError: 'NoneType' object has no attribute 'rownames'
|
|
2
|
1151
|
April 11, 2024
|
|
LEfSe: one-tailed or two-tailed p-values?
|
|
0
|
101
|
March 17, 2024
|
|
Format input file for Lefse
|
|
33
|
2594
|
March 7, 2024
|
|
Unnable to acces galaxy.biobakery.org - Proxy Error
|
|
6
|
568
|
March 6, 2024
|
|
Does a negative LDA score mean the abundance is less?
|
|
0
|
206
|
March 1, 2024
|
|
Formatting data for LEfSe
|
|
2
|
246
|
February 20, 2024
|
|
Request for Assistance: LEfSe Module File Upload Issue
|
|
2
|
241
|
February 19, 2024
|
|
How to use LEfSe locally with conda?
|
|
6
|
2013
|
January 29, 2024
|
|
Lefse or Deseq analysis?
|
|
1
|
315
|
January 22, 2024
|
|
Lefse analysis in R and result showed nothing
|
|
2
|
510
|
January 22, 2024
|