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Decomposition method not available in recent halla versions?
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2
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93
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December 21, 2020
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Plotting Hallagram with big datasets
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1
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76
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December 21, 2020
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Maaslin2 with presence/absence data
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1
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63
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December 17, 2020
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Maaslin2 heatmap
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1
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76
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December 17, 2020
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Different results running GLM and Maaslin2 using same methods/transformations
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4
|
172
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December 17, 2020
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OTUs as a unique code or enter them as a taxonomic hierarchy
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1
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60
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December 9, 2020
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Paired samples by ID
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5
|
82
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December 7, 2020
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LEfSe in galaxy inaccessible
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|
6
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104
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December 7, 2020
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How to prepare MetaPhlAN output table for feeding into MaAsLin 2?
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3
|
180
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November 19, 2020
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Should I report the "significant_results.tsv" as biomarkers after default run (considering q-value 0.25)?
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1
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111
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December 4, 2020
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Values in Columns after run_lefse.py
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0
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82
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December 3, 2020
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LEfSe reporting a marker as significant when it isn't?
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2
|
119
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December 2, 2020
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Reference values for a categorical fixed effect variable
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|
17
|
263
|
December 2, 2020
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Run WGCNA output with Maaslin
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3
|
50
|
December 1, 2020
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Output All results N.not.0=0
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5
|
255
|
December 1, 2020
|
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Number of features in the original database leads to different number of significantly discriminative features in LEfSe?
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|
1
|
112
|
November 29, 2020
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Maaslin2 outputs empty plots
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|
2
|
102
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November 25, 2020
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Coefficient value greater than 1
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|
4
|
189
|
November 23, 2020
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Filtering MaAsLin results based on coefficients
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5
|
130
|
November 21, 2020
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Dataset not run by LefSe in galaxy at second step. b) LDA effect size (LefSe)
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0
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77
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November 20, 2020
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Running MetaPhlAn3 output with MaAsLin2 and Lefse: Highly different result
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|
4
|
225
|
November 19, 2020
|
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LEfSe analysis, plotting negative LDA score (log10)
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1
|
125
|
November 18, 2020
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Lefse without any subclass- still valid?
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|
5
|
502
|
November 18, 2020
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Maaslin2 output model
|
|
2
|
118
|
November 18, 2020
|
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Comprehensive names/aliases of taxonomy units in the gut microbiome
|
|
1
|
62
|
November 17, 2020
|
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Documentation of options for analysis_method/transform/normalization
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|
1
|
152
|
November 14, 2020
|
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Is Lefse analysis appropriate for metabolomic data of a envorinmental samples?
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|
2
|
67
|
November 11, 2020
|
|
Undefined columns error in MaAsLin2
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|
5
|
164
|
November 11, 2020
|
|
Different result from lefse at genus level when used metaphlan output profile upto genus and species level
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|
2
|
130
|
November 10, 2020
|
|
Lefse on small sample size
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|
4
|
297
|
November 9, 2020
|