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How to include other subclades/taxa in the resulting plot?
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1
|
32
|
February 18, 2025
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How to create a nested random effect in maaslin3
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8
|
72
|
February 12, 2025
|
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MaAsLin3 total abundance scaling with basic 16S qPCR
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1
|
22
|
February 10, 2025
|
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Maaslin3 significant feature not shown in summary plot
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3
|
59
|
February 4, 2025
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MTXmodel normalisation on dna data
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1
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8
|
February 3, 2025
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Ccrepe output in one row
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0
|
8
|
January 31, 2025
|
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Is normalization applied before or after filtering in maaslin3?
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1
|
35
|
January 30, 2025
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Number of Reads Metagenomic Data for Maaslin3
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5
|
50
|
January 28, 2025
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How are fixed effect p-values calculated in MaAsLin2?
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1
|
36
|
January 24, 2025
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CLR normalisation ouput
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7
|
342
|
January 23, 2025
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How to use maaslin2
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2
|
75
|
January 14, 2025
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Including random effect causes R session to abort
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6
|
65
|
January 7, 2025
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Potential Bug in `maaslin3` with `input_metadata` Parameter
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1
|
31
|
January 6, 2025
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MaAsLin3 with estimated microbial load
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|
8
|
98
|
December 24, 2024
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Regarding Maaslin2, an error occurred during the running process: Error in initializePtr() : The package 'cholmod_factor_ldetA' does not provide a function like 'Matrix'
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4
|
25
|
December 20, 2024
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Questions about the parameter unit
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1
|
28
|
December 18, 2024
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MaAsLin2 CLR transformation differing results
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1
|
68
|
December 18, 2024
|
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"Error in if (x == y) x else gsub(x, "", y) : missing value where TRUE/FALSE needed" with Maaslin2 analysis
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1
|
19
|
December 18, 2024
|
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Different results running GLM and Maaslin2 using same methods/transformations
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6
|
2218
|
December 12, 2024
|
|
Installing Maaslin2 from Bioconductor
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4
|
824
|
December 9, 2024
|
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Maaslin2 (v1.12.0) issue with metadata catagories
|
|
2
|
29
|
November 28, 2024
|
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Print all groups that satisfy the p-value cutoff in .res file (not just top lda group)
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0
|
12
|
November 27, 2024
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MaAsLin3 _ NA in heatmap plot
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|
1
|
40
|
November 27, 2024
|
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Using Maaslin2 for "effect removal"
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|
1
|
44
|
November 26, 2024
|
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MaAslin2 result differs from original expr and subsetted expr
|
|
1
|
27
|
November 26, 2024
|
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Maaslin3 undefined columns selected
|
|
2
|
51
|
November 26, 2024
|
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Different results with LEfSe on between Galaxy and Conda
|
|
3
|
302
|
November 18, 2024
|
|
Exporting Results/LDA scores to .tsv with conda?
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3
|
210
|
November 18, 2024
|
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Lefse_bug LDA run had a bug
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2
|
134
|
November 12, 2024
|
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How to use coef_plot_vars?
|
|
1
|
41
|
November 11, 2024
|