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Different p value in models_linear.rds and significant_results.tsv
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2
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21
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February 27, 2026
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95% confidence interval of coef - MaAsLin2
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3
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41
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February 21, 2026
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Small sample correction
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5
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65
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February 20, 2026
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LEfSe analysis, plotting negative LDA score (log10)
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2
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2142
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February 19, 2026
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Analyzing Weekly Changes in Bacterial Profiles Following Repeated Administration of Formulations (MaAsLin 3)
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2
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49
|
February 17, 2026
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Blanks/Negative Controls/Positive Controls in Maaslin
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2
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23
|
February 15, 2026
|
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Maaslin3 error message
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5
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111
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February 12, 2026
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Maaslin3 summary plot only showing 1 variable heatmap
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1
|
98
|
February 11, 2026
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Maaslin2 error reporting in RStudio
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4
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59
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February 5, 2026
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Interpretation of interaction terms
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4
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236
|
February 5, 2026
|
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Maaslin3 issue error message
|
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9
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236
|
February 3, 2026
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Q-values on produced graphs and 'significant_results.tsv' not lining up
|
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3
|
51
|
February 3, 2026
|
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Can pval be used to compare microbial differences between the two groups only?
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2
|
30
|
January 30, 2026
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Pval_joint varies with number of features
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7
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44
|
January 29, 2026
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Where can I find the relative abundance result file after correcting the covariates with MaAslin2 analysis
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6
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56
|
January 29, 2026
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Input Taxonomy and Metadata unavailable on galaxy
|
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3
|
25
|
January 28, 2026
|
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Merging results of metaphlan and humman tables for two batches of the same study (two different timepoints)
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10
|
153
|
January 25, 2026
|
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Cannot generate summary plot
|
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3
|
58
|
January 23, 2026
|
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MaAslin2 examples failure
|
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1
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22
|
January 23, 2026
|
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Question about 'baselines' for effects Maaslin3
|
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8
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91
|
January 23, 2026
|
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How to use anpan
|
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2
|
29
|
January 23, 2026
|
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Time-series data (Longitudinal) analysis in MaAslin3
|
|
1
|
80
|
January 22, 2026
|
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Out-of-memory handler error while running halla
|
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0
|
7
|
January 22, 2026
|
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Inquiry regarding FDR adjustment with covariates
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1
|
60
|
January 9, 2026
|
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Super basic query about taxa file for Maaslin3
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6
|
63
|
December 23, 2025
|
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Comparing a Single Sample to Multiple Samples Using MaAsLin
|
|
1
|
45
|
December 18, 2025
|
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MaAsLin 3: Forcing X-axis variable for Interaction Plots (Diagnosis * Time)
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1
|
62
|
December 17, 2025
|
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Error: <ggplot2::labels> object is invalid:
|
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1
|
143
|
December 16, 2025
|
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Association between microbiome feature and next timepoint outcome
|
|
1
|
38
|
December 15, 2025
|
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[Huttenhower Lab Galaxy for LEfSE]
|
|
1
|
100
|
December 10, 2025
|