|
Warning non-integer counts, ZINB and TMM
|
|
4
|
276
|
December 12, 2023
|
|
Maaslin2 not recognizing reference group
|
|
1
|
177
|
December 11, 2023
|
|
Maaslin2 q value calculation
|
|
3
|
304
|
December 11, 2023
|
|
The label in Cladogram is not centered
|
|
2
|
442
|
December 6, 2023
|
|
R session aborted when running random_effect
|
|
4
|
261
|
December 6, 2023
|
|
LEfSe not showing the comparator group
|
|
0
|
104
|
November 30, 2023
|
|
Lefse galaxy and conda codes
|
|
2
|
488
|
November 30, 2023
|
|
Normalization with lots of unmapped humann reads
|
|
1
|
161
|
November 28, 2023
|
|
MaAsLin2 pathway data variable names too large
|
|
2
|
243
|
November 22, 2023
|
|
Does MaAsLin2 have MIT License?
|
|
1
|
111
|
November 15, 2023
|
|
Lefse plot advance graphical options
|
|
0
|
139
|
November 13, 2023
|
|
rCLR transformation
|
|
2
|
180
|
November 6, 2023
|
|
Trying to understand coef column (and how to convert it to fold change)
|
|
14
|
2964
|
November 5, 2023
|
|
Galaxy/Hutlab website issue
|
|
1
|
421
|
November 5, 2023
|
|
Error in Format Data for LEfSe
|
|
10
|
857
|
November 1, 2023
|
|
Maaslin2 all-groups outcome different from paired-groups
|
|
2
|
224
|
November 2, 2023
|
|
Lefse - error in format file
|
|
3
|
250
|
November 1, 2023
|
|
MaAsLin2 and model.matrix variables
|
|
1
|
271
|
October 30, 2023
|
|
LEfSe Module B error
|
|
0
|
164
|
October 27, 2023
|
|
No access to online LefSe
|
|
7
|
1338
|
October 25, 2023
|
|
MaAsLin 2 for longitudinal analysis with different individuals
|
|
6
|
487
|
October 25, 2023
|
|
Maaslin2 heatmap and significance_results table
|
|
2
|
267
|
October 25, 2023
|
|
Alternative ways to illustrate results
|
|
1
|
273
|
October 24, 2023
|
|
Log transformation pseudo-count
|
|
3
|
1557
|
October 24, 2023
|
|
MassLin2: is there a limited number of fixed effects?
|
|
3
|
1095
|
October 24, 2023
|
|
Lefse Problem in module B (run LDA)
|
|
2
|
281
|
October 23, 2023
|
|
Lefse commands in docker
|
|
1
|
438
|
October 20, 2023
|
|
Different results with LEfSe between Galaxy and Conda
|
|
1
|
206
|
October 17, 2023
|
|
Can't access the Galaxy module LEfSe
|
|
2
|
519
|
October 13, 2023
|
|
No access to online leffse
|
|
9
|
923
|
October 12, 2023
|