Hello,
First time user of LEfSe via galaxy. I organized my dataset according to the input file format guide on the galaxy page. Initially, when I import, it says size is big (paraphrasing), I compressed and uploaded. But when I execute format data for Lefse, it immediately shown error “Traceback (most recent call last):
File “/galaxy_venv/bin/lefse_format_input.py”, line 33, in
sys.exit(load_entry_point(‘lefse==1.1.2’, ‘console_scripts’, ‘lefse_format_input.py’)())
File “/galaxy_venv/bin/lefse_format_input.py”, line 25”
To check if it was from my dataset, I downloaded the hmp_aerobiosis_small.txt dataset, imported and tried the same. Again the same error as above. Is it a server thing? datatype? Can someone kindly help? please.
Thanks, Wos