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About the PhyloPhlAn category
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0
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508
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October 31, 2019
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Phylophlan_metagenomic: unable to download databases
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1
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15
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June 15, 2021
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Unable to create the tree of life: IsADirectoryError: [Errno 21] Is a directory: '/home/ubuntu/phylophlan/PhyloPhlAn.egg-info'
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2
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24
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June 3, 2021
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Metagenomic - little confused
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7
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50
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June 2, 2021
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Utterly confused - PhloPhlAn 2 -> PhyloPhlAn 3 - how to characterise MAGs
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2
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166
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June 2, 2021
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Phylophlan_metagenomic crashed
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3
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109
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May 10, 2021
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PhyloPhlAn: using a manually downloaded database
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16
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94
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April 30, 2021
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PhyloPhlAn 3 - E coli input produces "[e] No alignments found to concatenate"
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2
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134
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April 20, 2021
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Is there some database update than "taxa2core_cpa201901_up201901.txt.bz2"?
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1
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35
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April 12, 2021
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Speeding up PhyloPhlAn (RAxML-HPC step)
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1
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61
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April 2, 2021
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raxmlHPC failed: [e] refine_gene_tree crashed
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10
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86
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January 26, 2021
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Is there a way to use phylophlan_metagenomic with the phylophlan database?
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1
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87
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January 26, 2021
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Explanation of the output of phylophlan_metagenomic
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2
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79
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January 21, 2021
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Pre-downloading PhyloPhlAn databases?
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1
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128
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January 21, 2021
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Error running FastTreeMP step
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5
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149
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January 21, 2021
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PhyloPhlAn Crash-------
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2
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337
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January 20, 2021
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Quantifying uncertainty the level of uncertainty in phylophlan_metagenomic
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2
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95
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January 14, 2021
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Supermatrix alignment has varying length -> error in tree build
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2
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83
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January 8, 2021
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Isolates_config.cfg from S aureus example in tutorial
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2
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83
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December 9, 2020
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UnboundLocalError: local variable 'input_faa_clean' referenced before assignment
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2
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604
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December 8, 2020
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How many markers included in Phylophlan concatenated alignment?
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1
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127
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October 2, 2020
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Phylophlan v3, which usearch version needed?
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2
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121
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October 2, 2020
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How to draw a beautiful evolutionary tree
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1
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190
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September 14, 2020
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This sequence may be truncated, or another sequence may be too long?
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9
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445
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September 11, 2020
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Tree rooting with PhyloPhlan
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2
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198
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August 12, 2020
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PhyloPhlAn database
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2
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337
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July 22, 2020
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Configuration file error
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1
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255
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June 29, 2020
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PhyloPhlAn for partial sequence
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1
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172
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June 1, 2020
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Strainphlan_config & line 655 TypeError
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2
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409
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June 1, 2020
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Phylophlan version - installing from conda
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7
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436
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May 18, 2020
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