About the PhyloPhlAn category
|
|
0
|
887
|
October 31, 2019
|
No inputs found error
|
|
1
|
29
|
March 28, 2023
|
Phylophlan3 not creating markers for all input genomes
|
|
1
|
43
|
March 28, 2023
|
[e] No alignments found to concatenate
|
|
3
|
38
|
March 28, 2023
|
Wrong assignment of Phylogeny
|
|
1
|
10
|
March 28, 2023
|
Phylophlan_write_config_file: threads parameter
|
|
1
|
12
|
March 28, 2023
|
Phylophlan3: confusing CLI help docs
|
|
2
|
9
|
March 28, 2023
|
Phylophlan error after generating the concatenated alignment
|
|
1
|
23
|
March 20, 2023
|
FileNotFoundError/FileExistsError. Either way if I have the file in question present or not
|
|
0
|
23
|
March 1, 2023
|
Unable to download proteins
|
|
5
|
194
|
January 24, 2023
|
Building Phylogenetic Tree - [e] gene_markers_selection crashed
|
|
2
|
48
|
January 17, 2023
|
Phylophlan is always running with nothing returned
|
|
2
|
118
|
January 10, 2023
|
High resolution analysis reference genome download
|
|
1
|
67
|
January 10, 2023
|
Inputting data into phylophlan_metagenomic
|
|
1
|
61
|
January 10, 2023
|
Diversity --high and --low parameter
|
|
1
|
81
|
November 18, 2022
|
Running time during mapping with diamond
|
|
1
|
147
|
November 18, 2022
|
File "/home/wakisa/miniconda3/envs/phylophlan/lib/python3.10/site-packages/scipy/spatial/distance.py", line 2555, in num_obs_y raise ValueError("The number of observations cannot be determined on " ValueError: The number of observations cannot be dete
|
|
3
|
63
|
November 18, 2022
|
Nothing happens after building phylogeny
|
|
1
|
69
|
October 13, 2022
|
No taxonomy in phylogenetic tree generated by phylophlan
|
|
3
|
154
|
October 12, 2022
|
Phylophlan is running too slow when mapping DNA
|
|
3
|
171
|
October 12, 2022
|
PhyloPhlAn cannot use ASTRID for --tree1
|
|
1
|
91
|
September 15, 2022
|
Get all reference error
|
|
1
|
141
|
September 2, 2022
|
Is there a way to use phylophlan_metagenomic with the phylophlan database?
|
|
3
|
394
|
September 2, 2022
|
Phylophlan running in loop
|
|
1
|
85
|
August 26, 2022
|
Unable to run example 1
|
|
5
|
222
|
August 3, 2022
|
Speeding up PhylophlAn
|
|
1
|
148
|
June 30, 2022
|
Clades missing in phylogenetic tree
|
|
5
|
150
|
May 31, 2022
|
What are the limitations for number of input sequences?
|
|
6
|
194
|
May 16, 2022
|
How to draw a beautiful evolutionary tree
|
|
3
|
543
|
April 8, 2022
|
Issue with getting reference genomes
|
|
4
|
167
|
April 2, 2022
|