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About the PhyloPhlAn category
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0
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1236
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October 31, 2019
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Missing dependency pyrodigal in bioconda recipe/biocontainers
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1
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18
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June 10, 2026
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How long does it usually take to build a phylogenetic tree with PhyloPhlAn 3 using about 30 genomes?
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0
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19
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January 17, 2026
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FastTreeMP execution error
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0
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24
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August 4, 2025
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Ethiopian tutorial error
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1
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70
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July 2, 2025
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Can't download the Ethiopian genome bins（Ethiopian MAGs））
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0
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28
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June 30, 2025
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How to skip alignment step and use pre-aligned core genes for phylogeny?
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0
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24
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June 30, 2025
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Unable to run example 1
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7
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919
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June 23, 2025
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Phylophlan questions
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0
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38
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June 19, 2025
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[e] gene_markers_identification crashed
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0
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21
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June 18, 2025
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[e] No alignments found to concatenate
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4
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624
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June 13, 2025
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PhyloPhlAn in Galaxy: Requesting test database for phylophlan_assign_sgbs
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0
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51
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May 18, 2025
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Phylophlan not considering all the MAGs for creation of .tre file
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0
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30
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April 25, 2025
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Trouble with Arguments and Time it Takes to Make Tree
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0
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50
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February 24, 2025
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Explanation of the output of phylophlan_metagenomic
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3
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992
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February 10, 2025
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Result of phylophlan_assign_sgbs resulting in error in phylophlan_draw_metagenomic?
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0
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51
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January 28, 2025
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Phylophlan: problem with bootstrap instructions in the config file
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0
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44
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December 22, 2024
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No metabat_bin is assigned by PhyloPhlan --- metabat_bin.# is close to an SGB not present in the SGB.Jun23 database
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3
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123
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October 22, 2024
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[e] gene_markers_selection crashed (SOLUTION)
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0
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45
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October 7, 2024
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Error when running PhyloPhlAn [e] No alignments found to concatenate
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0
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31
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August 28, 2024
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Error phylophlan_assign_sgbs.py
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3
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78
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August 7, 2024
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Phylophlan: error: unrecognized arguments: --strainphlan
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5
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363
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August 7, 2024
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PhyloPhlAn 3: Example 05: Proteobacteria ANI figure
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1
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25
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August 7, 2024
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Phylogenetic tree for 2000 genomes
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2
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185
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July 11, 2024
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Questions about the command in Step1 of Example 02
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1
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49
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July 11, 2024
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How to use GTDB database using phylophlan
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3
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305
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July 11, 2024
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Phylophlan-3.1.1 :: setup.py miss requests in requirements
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0
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84
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April 22, 2024
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Phylophlan arcahea clustering within bacteria
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4
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245
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April 10, 2024
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[e] both db_dna and db_aa are None!
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0
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173
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March 27, 2024
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PhyloPhlAn: using a manually downloaded database
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18
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2493
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February 10, 2024
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