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About the PhyloPhlAn category
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0
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743
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October 31, 2019
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Speeding up PhylophlAn
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1
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16
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June 30, 2022
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Clades missing in phylogenetic tree
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5
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56
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May 31, 2022
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What are the limitations for number of input sequences?
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6
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64
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May 16, 2022
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How to draw a beautiful evolutionary tree
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3
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400
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April 8, 2022
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Issue with getting reference genomes
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4
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77
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April 2, 2022
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Issues with downloading some reference genomes
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1
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45
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March 25, 2022
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Build phylogenetic tree from a database
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1
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48
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March 17, 2022
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Various PhyloPhlAn 3.0 Errors for Nucleotide MAGs and Genomes
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3
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80
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February 23, 2022
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Phylophlan Tree of Life Differences
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2
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158
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January 12, 2022
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Phylophlan - creating database of markers
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9
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279
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November 26, 2021
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Database Download Error
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2
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149
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November 10, 2021
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Phylophlan3 database in phylophlan command
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5
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181
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September 29, 2021
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Just installed PhyloPhlAn 3.0.06, missing the tutorial folder
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2
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147
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September 29, 2021
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PhyloPhlAn: Not enought markers
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1
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178
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August 30, 2021
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Error on iqtree step
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6
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339
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August 13, 2021
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Prokaryotic tree reconstruction pipeline issue
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5
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164
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August 9, 2021
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Error while executing raxmlHPC-PTHREADS-SSE3
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4
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204
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July 22, 2021
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Phylophan and Binned fasta
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9
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300
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July 7, 2021
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Using multiple cores with Mac
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1
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140
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June 23, 2021
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Phylophlan_metagenomic: unable to download databases
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1
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188
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June 15, 2021
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Unable to create the tree of life: IsADirectoryError: [Errno 21] Is a directory: '/home/ubuntu/phylophlan/PhyloPhlAn.egg-info'
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2
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592
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June 3, 2021
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Metagenomic - little confused
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7
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200
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June 2, 2021
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Utterly confused - PhloPhlAn 2 -> PhyloPhlAn 3 - how to characterise MAGs
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2
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456
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June 2, 2021
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Phylophlan_metagenomic crashed
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3
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308
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May 10, 2021
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PhyloPhlAn: using a manually downloaded database
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16
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731
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April 30, 2021
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PhyloPhlAn 3 - E coli input produces "[e] No alignments found to concatenate"
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2
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410
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April 20, 2021
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Is there some database update than "taxa2core_cpa201901_up201901.txt.bz2"?
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1
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147
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April 12, 2021
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Speeding up PhyloPhlAn (RAxML-HPC step)
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1
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329
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April 2, 2021
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raxmlHPC failed: [e] refine_gene_tree crashed
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10
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437
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January 26, 2021
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