How to use GTDB database using phylophlan

Microbial community profiling PhyloPhlAn
1

I want to use GTDB database (manually downloaded) with phylophlan. Kindly guide me through the steps.

2

Hi there, have you checked out the Database setup section of the wiki? You should be able to find all the info you need there.

Please, let me know if something is not clear.

Thanks,
Francesco