About the Microbial community profiling category
|
|
0
|
810
|
November 12, 2019
|
Question About HUMAnN Output Filtering for SGB-Level Contributions
|
|
0
|
6
|
May 21, 2025
|
Humann database errors (a short novel)
|
|
10
|
157
|
May 20, 2025
|
Can I use the option --bowtie2out (for StrainPhlan!) along HUMANn?
|
|
2
|
14
|
May 19, 2025
|
HUMAnN 3.9 fails when using '-t' flag with MetaPhlAn >4.0.6
|
|
0
|
4
|
May 19, 2025
|
Understanding RPK values
|
|
2
|
10
|
May 19, 2025
|
Error in merge_metaphlan_tables.py
|
|
1
|
12
|
May 19, 2025
|
HUMAnN 3.9: Low percentage in “Selected species explain X% of predicted community composition”
|
|
2
|
6
|
May 19, 2025
|
PhyloPhlAn in Galaxy: Requesting test database for phylophlan_assign_sgbs
|
|
0
|
2
|
May 18, 2025
|
Large percentage of unmapped pathways,
|
|
4
|
29
|
May 16, 2025
|
Humann 4.0 alpha in workflow
|
|
5
|
172
|
May 16, 2025
|
Error Using --write-details in waafle_orgscorer (WAAFLE Tutorial Step 3)
|
|
0
|
1
|
May 8, 2025
|
Mock Community & Gut Microbiome Benchmarking
|
|
1
|
25
|
May 8, 2025
|
MetaPhlan4 drastically underestimate the abundance of Bacillus_subtilis|t__SGB7788
|
|
5
|
477
|
May 7, 2025
|
MetaPhlAn did not detect any taxa in the tutorial sample
|
|
0
|
14
|
April 28, 2025
|
Phylophlan not considering all the MAGs for creation of .tre file
|
|
0
|
7
|
April 25, 2025
|
HUMAnN - RuntimeError: can't allocate lock
|
|
2
|
14
|
April 23, 2025
|
Humann3 without prior metaphlan run
|
|
4
|
42
|
April 21, 2025
|
Install and running Humann for the first time
|
|
2
|
23
|
April 18, 2025
|
Humans database
|
|
9
|
324
|
April 18, 2025
|
MACARRoN Capacity to Perform Differential Abundance Testing
|
|
0
|
5
|
April 17, 2025
|
Question on quantifying the LGT events in waafle
|
|
6
|
514
|
April 12, 2025
|
What are typical unmapped and unintegrated fractions
|
|
1
|
19
|
April 11, 2025
|
Compatibility of uniref50 with HUMAnN4
|
|
1
|
16
|
April 11, 2025
|
Humann4 databases,full
|
|
1
|
68
|
April 11, 2025
|
Normalization method at HUMAnN4a output
|
|
2
|
36
|
April 11, 2025
|
Cannot download Chocophlan database
|
|
22
|
2124
|
April 11, 2025
|
Errors when running Humann 3.8
|
|
2
|
39
|
April 11, 2025
|
Conversion of HUMAnN taxonomy outputs to GTDB
|
|
1
|
29
|
April 11, 2025
|
Missing relative abundance and coverage error for humann4a
|
|
1
|
15
|
April 11, 2025
|