About the Microbial community profiling category
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0
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833
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November 12, 2019
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MetaPhlAn / CHOCOPhlAn version mismatch while doing humann 3 analysis
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0
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1
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August 30, 2025
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HUMAnN 4.2 for long read data
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6
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64
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August 29, 2025
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Make downloads available in https
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0
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33
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January 10, 2025
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Missing relative abundance and coverage error for humann4a
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2
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52
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August 29, 2025
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Adding a --metaphlan-options and/or bowtie2db flag to baqlava
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0
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2
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August 28, 2025
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Humann v3.8 misinterprets non-default analysis types, ie "-t rel_ab_w_read_stats", results from metaphlan 4.1
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4
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38
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August 28, 2025
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Metaphlan-informed taxonomic stratification and its discrepancies with unirefids
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2
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11
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August 27, 2025
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Are humann_regroup_table (utility_mapping) command and flag –utility-database in HUMANnN v4.0.0.alpha.1 doing the same thing?
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2
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18
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August 28, 2025
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How to explain Strainphlan treeshrink parameter output
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0
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3
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August 28, 2025
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Long read minimap2 error
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0
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4
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August 28, 2025
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Statistical Approach for Comparing Functional Potential of Selected SGBs vs. Community Background
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3
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24
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August 28, 2025
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Errors with humann-metaphlan
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0
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8
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August 27, 2025
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When using MetaPhlAn 4.2.2 for species annotation,Ubuntu automatically crashes.
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0
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1
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August 27, 2025
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Humann3 Paired end reads
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20
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5931
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August 27, 2025
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HUMAnN - Pathway contribution data
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1
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34
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August 27, 2025
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HUMAnN MinPath drastically reducing pathway counts and inconsistent results
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1
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18
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August 27, 2025
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Humann ERROR: Metaphlan is trying to edit the database folder directly
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1
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10
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August 27, 2025
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HUMAnN installs for Python 3.12 in a Python 3.13 environment
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1
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17
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August 27, 2025
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Inconsistent species-level contributions to pathways across runs with identical inputs
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3
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25
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August 27, 2025
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Metaphlan 4 using with Humann3.9
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1
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31
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August 27, 2025
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Uniref90 Gene Families to Pathways
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8
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1108
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August 27, 2025
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Thoughts on custom humann3 reference databases
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9
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1904
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August 27, 2025
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How to get count data (not RPK)?
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1
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8
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August 27, 2025
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HUMAnN pathway coverage: community total ≪ species coverage. Why can this happen?
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2
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19
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August 27, 2025
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Question about "X" in marker sequences from shortbred_identify.py
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0
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5
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August 26, 2025
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About duplicate reads
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2
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341
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August 25, 2025
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MetaPhlAn database download stalls at 16.57%
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2
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24
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August 21, 2025
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[Errno 21] Is a directory" during .nwk download & "database partially present" warning
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0
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12
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August 21, 2025
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MetaPhlAn unrecognized argument --bowtie2out
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6
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292
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August 20, 2025
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