Latest Microbial community profiling topics

Topic	Replies	Views	Activity
Would MetaPhlAn support PE mapping in future version? MetaPhlAn	8	34	November 30, 2022
High Memory Usage of sample2markers.py MetaPhlAn	6	40	November 30, 2022
Humann 3.6 --resume HUMAnN	0	17	November 29, 2022
Missing bacterial species in Metaphlan4 MetaPhlAn	1	96	November 28, 2022
Too many unclassified reads? MetaPhlAn	3	49	November 28, 2022
Output of prioritization workflow MetaWIBELE	3	16	November 27, 2022
Announcing MetaPhlAn 4 MetaPhlAn MetaPhlAn 4 Release Notes The new MetaPhlAn 4 integrates information from both metagenome assemblies and microbial isolate genomes for improved and more comprehensive metagenomic taxonomic profiling (https://doi.org/10.…	6	1012	November 25, 2022
Metaphlan - ConStrains MetaPhlAn	1	17	November 25, 2022
How to install the latest metaphlan reference DB? MetaPhlAn	12	595	November 25, 2022
Unable to use MetaPhlAn-4 database MetaPhlAn	1	34	November 25, 2022
Docker image seem don't work Microbial community profiling	0	14	November 24, 2022
Panphlan database Microbial community profiling	0	9	November 23, 2022
Finding specific sequences in the database MetaPhlAn	1	23	November 21, 2022
Metaphlan3 keeps giving an UNKNOWN 100 output MetaPhlAn	13	216	November 21, 2022
Alternative SGB2GTDB for SGBXXX_group MetaPhlAn	1	19	November 21, 2022
ValueError: Unable to find binary or script `metaphlan' MetaPhlAn	7	61	November 21, 2022
Transformation of preprocessed metabolomic data for using as MelonnPan input file MelonnPan	1	26	November 20, 2022
Diversity --high and --low parameter PhyloPhlAn	1	36	November 18, 2022
Running time during mapping with diamond PhyloPhlAn	1	40	November 18, 2022
File "/home/wakisa/miniconda3/envs/phylophlan/lib/python3.10/site-packages/scipy/spatial/distance.py", line 2555, in num_obs_y raise ValueError("The number of observations cannot be determined on " ValueError: The number of observations cannot be dete PhyloPhlAn	3	40	November 18, 2022
Conda install metawibele failed MetaWIBELE	3	40	November 18, 2022
Humann3 metatranscriptome analysis stuck at nucleotide alignment post processing HUMAnN	2	34	November 17, 2022
Maaslin.tar.gz - newest version? Microbial community profiling	0	8	November 16, 2022
No MetaPhlAn BowTie2 database found (--index option)! HUMAnN	20	2922	November 15, 2022
Use bowtie2 "--no-head" to replace "if" statement MetaPhlAn	2	16	November 14, 2022
Gzip fastq as input MetaPhlAn	15	956	November 11, 2022
StrainPhlan4: No markers were found for the clade StrainPhlAn	3	40	November 11, 2022
Merge_metaphlan_table.py Error MetaPhlAn	1	36	November 6, 2022
Have the basic work flow changed between HuManN version 2 and 3? HUMAnN	5	47	November 4, 2022
Metaphlan4 BrokenPipeError MetaPhlAn	1	32	November 2, 2022

Would MetaPhlAn support PE mapping in future version?

MetaPhlAn

8

34

November 30, 2022

High Memory Usage of sample2markers.py

MetaPhlAn

6

40

November 30, 2022

Humann 3.6 --resume

HUMAnN

0

17

November 29, 2022

Missing bacterial species in Metaphlan4

MetaPhlAn

1

96

November 28, 2022

Too many unclassified reads?

MetaPhlAn

3

49

November 28, 2022

Output of prioritization workflow

MetaWIBELE

3

16

November 27, 2022

Announcing MetaPhlAn 4

MetaPhlAn

MetaPhlAn 4 Release Notes The new MetaPhlAn 4 integrates information from both metagenome assemblies and microbial isolate genomes for improved and more comprehensive metagenomic taxonomic profiling (https://doi.org/10.…