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About the StrainPhlAn category
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0
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677
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November 12, 2019
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Samples2markers.py: MarkerXX not in the metaphlan database
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2
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14
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November 5, 2024
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Sample2markers.py faced Error
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1
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74
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October 24, 2024
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Inquiry regarding change of default parameters in StrainPhlAn
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1
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35
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September 23, 2024
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StrainPhlan clade "s__Akkermansia_muciniphila" not accepted and should provide in SGB format
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5
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559
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September 23, 2024
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StrainPhlan sample2markers.py loading database
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1
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21
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September 23, 2024
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Strainphlan consensus markers
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1
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43
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September 23, 2024
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StrainPhlAn Tutorial Error
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0
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25
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August 25, 2024
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Problem running StrainPhlan
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6
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1319
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August 21, 2024
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StrainPhLan4 and GTDB
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0
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30
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July 15, 2024
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Samfile error when applying strainphlan to output .bz2 files of metaphlan
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2
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231
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July 3, 2024
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Strain_transmission.py not detecting transmission events
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10
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506
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June 5, 2024
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The number of "samples" in strainphlan's result file exceeded the number of my macro gene sequencing samples
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1
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82
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June 4, 2024
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Error occuring at Phylophlan execution while running Strainphlan 4
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3
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323
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June 4, 2024
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Couldnt create consensus markers
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1
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59
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June 3, 2024
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StrainPhlAn Usage for Bacterial SNP Annotation
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2
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185
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May 23, 2024
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Sample2markers don't generate any pkl files, but instead generate json.bz2 files
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5
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180
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April 30, 2024
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StrainPhlan 4 tutorial issues
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3
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604
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March 22, 2024
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Request to determine the threshold for strain transfer
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1
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190
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March 18, 2024
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Phylophlan mafft problem (implemented in strainphlan)
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5
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1576
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March 18, 2024
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Strainphlan: [e] Parallel execution fails: Ran out of input
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1
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110
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March 14, 2024
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PhyloPhlAn database error during StrainPhlAn 4 run
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11
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849
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March 8, 2024
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Query on Strain Identification Methods and Comparisons in StrainPhlAn4 Usage
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0
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204
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December 20, 2023
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Encountering an error in sample2markers.py -i SRS013951.sam.bz2 -o pkl_files/
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4
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306
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November 11, 2023
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NaN value after distmat in StrainPhlAn
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3
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361
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October 12, 2023
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StrainPhlAn no clades found
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0
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248
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October 8, 2023
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Strainphlan error
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4
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290
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October 6, 2023
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Can I get ID's for the actual strains from strainphlan?
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1
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169
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September 22, 2023
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Scripting with strainphlan.py
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3
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256
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September 1, 2023
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Metaphlan4 and graphlan compatability
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2
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353
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August 22, 2023
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