|
About the StrainPhlAn category
|
|
0
|
776
|
November 12, 2019
|
|
Strainphlan sample2markers.py ERROR
|
|
7
|
152
|
July 24, 2026
|
|
StrainPhlAn for detection of known strains in mixed-strain samples
|
|
0
|
27
|
March 31, 2026
|
|
Inquiry regarding the compatible ChocoPhlAn database version for MetaPhlAn 4.2.4 and StrainPhlAn 4.1
|
|
0
|
17
|
March 27, 2026
|
|
StrainPhlAn Reference Genomes
|
|
0
|
88
|
October 16, 2025
|
|
StrainPhlAn `print_clades_only` produces no clades in file
|
|
2
|
41
|
September 15, 2025
|
|
How to explain Strainphlan treeshrink parameter output
|
|
0
|
36
|
August 28, 2025
|
|
StrainPhlan tutorial typo
|
|
0
|
65
|
June 26, 2025
|
|
StrainPhlan tutorial error - cannot add metadata to tree
|
|
0
|
36
|
June 18, 2025
|
|
Strainphlan strain transmission tutorial
|
|
0
|
87
|
April 10, 2025
|
|
Using strainphlan with long reads?
|
|
1
|
82
|
March 18, 2025
|
|
Filtering settings StrainPhlAn 4.1
|
|
8
|
258
|
February 26, 2025
|
|
Multiple reference genomes not in the output tree
|
|
4
|
982
|
March 26, 2021
|
|
Sample2markers don't generate any pkl files, but instead generate json.bz2 files
|
|
6
|
310
|
February 14, 2025
|
|
How to get strainphlan4 corresponding image installation mode?
|
|
0
|
35
|
February 6, 2025
|
|
Understanding strain_transmission.py output and "list index out of range" error
|
|
0
|
55
|
January 23, 2025
|
|
Samples2markers.py: MarkerXX not in the metaphlan database
|
|
2
|
69
|
November 5, 2024
|
|
Sample2markers.py faced Error
|
|
1
|
135
|
October 24, 2024
|
|
Inquiry regarding change of default parameters in StrainPhlAn
|
|
1
|
82
|
September 23, 2024
|
|
StrainPhlan clade "s__Akkermansia_muciniphila" not accepted and should provide in SGB format
|
|
5
|
637
|
September 23, 2024
|
|
StrainPhlan sample2markers.py loading database
|
|
1
|
72
|
September 23, 2024
|
|
Strainphlan consensus markers
|
|
1
|
85
|
September 23, 2024
|
|
StrainPhlAn Tutorial Error
|
|
0
|
79
|
August 25, 2024
|
|
Problem running StrainPhlan
|
|
6
|
1418
|
August 21, 2024
|
|
StrainPhLan4 and GTDB
|
|
0
|
64
|
July 15, 2024
|
|
Samfile error when applying strainphlan to output .bz2 files of metaphlan
|
|
2
|
287
|
July 3, 2024
|
|
Strain_transmission.py not detecting transmission events
|
|
10
|
680
|
June 5, 2024
|
|
The number of "samples" in strainphlan's result file exceeded the number of my macro gene sequencing samples
|
|
1
|
117
|
June 4, 2024
|
|
Error occuring at Phylophlan execution while running Strainphlan 4
|
|
3
|
368
|
June 4, 2024
|
|
Couldnt create consensus markers
|
|
1
|
109
|
June 3, 2024
|