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About the StrainPhlAn category
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0
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186
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November 12, 2019
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Strainphlan sample2markers.py AttributeError: 'NoneType' object has no attribute 'reference_free_consensus'
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2
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23
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July 29, 2021
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Distmat from strainphlan tutorial
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1
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25
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July 22, 2021
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Check number of markers for a particular bacterial species
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1
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26
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July 22, 2021
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Length of concatenated alignment file
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6
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48
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June 24, 2021
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Change coverage threshold for consensus markers
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3
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23
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June 15, 2021
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Help with workflow
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3
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38
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June 15, 2021
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"N" in strainphlan alignment output
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6
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78
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June 10, 2021
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Understanding branch length from strainphlan output
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3
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62
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June 9, 2021
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Metaphlan & Strainphlan Output Expectation
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2
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81
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May 29, 2021
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Strainphlan_config & Not found output/mutation_rates.tsv
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1
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51
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May 3, 2021
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Error when running extract_markers.py
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22
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671
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April 22, 2021
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Strainphlan Error: No matching key/data pair found
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1
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80
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April 19, 2021
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Problem running StrainPhlan
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5
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98
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April 9, 2021
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Multiple reference genomes not in the output tree
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4
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71
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March 26, 2021
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Run all clades once
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5
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139
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March 19, 2021
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Strainphlan question on get the strain info
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3
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120
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March 8, 2021
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Error running strainphlan
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9
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488
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February 12, 2021
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Strainphlan without an internet connection
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14
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237
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February 12, 2021
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Verbose output for strainphlan
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1
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86
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February 8, 2021
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Output phylogeny from [tree1] not recognized
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2
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70
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February 8, 2021
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Strainphlan sample2markers.py no module named cmseq
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8
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189
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February 4, 2021
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Tutorial is listing the wrong docker container
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1
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89
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February 4, 2021
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QUESTION: StrainPhlAn working with a genome?
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3
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153
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January 18, 2021
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Strainphlan_print_clades failed using BioBakery Docker Container
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1
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84
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January 15, 2021
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Fail to produce the consensus-marker files
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4
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174
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December 24, 2020
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No module named metaphlan.utils.cmseq
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13
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270
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December 1, 2020
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Question About StrainPhlAn3 Polymorphic Output File
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4
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195
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November 30, 2020
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Having issues with Strainphlan
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15
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904
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November 27, 2020
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Error related to step 3; reference genome
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5
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330
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November 23, 2020
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