HUMAnN

Topic	Replies	Views	Activity
Announcing HUMAnN 4.0 (alpha) Dear HUMAnN users: HUMAnN 4.0 (alpha) has arrived! Many thanks for your patience—we know there have been a lot of users looking forward to this release for a long time. Since a lot is changing in this version, we’re tryi…	2	331	November 4, 2024
Announcing HUMAnN 3.7 Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…	3	2293	May 4, 2023
Can you compare separate HUManN runs?	0	1	November 7, 2024
Humann/MetaPhlAn - The metaphlan executable can not be found	4	18	November 7, 2024
Bowtie2 unaligned reads slow	13	1901	November 6, 2024
Humann 4.0 alpha in workflow	0	7	November 5, 2024
Humann error concerning metaphanand databases	2	20	November 4, 2024
Question about humann 3.9 and vJun23_202403	0	10	November 1, 2024
KEGG Orthogroups count output	2	12	October 31, 2024
Deseq2 analysis of Humann3 outputs - clarification	3	40	October 30, 2024
Humann3 Paired end reads	19	5573	October 30, 2024
High Percentage of Unmapped and Unintegrated Reads in HUMAnN3 Analysis	2	31	October 30, 2024
How to convert MetaCyc pathway PWY into UniProt90 identifiers	1	10	October 30, 2024
No_name after humann_rename_table	1	6	October 30, 2024
Humann_unpack_pathways command	4	168	October 18, 2024
Humann3 humann_renorm_table output downstream analysis	6	25	October 17, 2024
Problems with Eggnog renaming from grouped table	6	264	October 11, 2024
Humann_regroup_table lost uniref90_ko,uniref90_levelec	1	19	October 11, 2024
Help with Understanding Microbial Community Analysis Tools	1	25	October 11, 2024
HUMAnN 3.8 - How to get taxonomic results at the order level instead of genus?	3	42	October 11, 2024
Functional gene normalization	1	30	October 11, 2024
Getting error "Zero gene tables were found to join." with humann_join_table	1	59	October 1, 2024
Error "The directory provided for ChocoPhlAn does not contain files of the expected format" exists after checking the location of the databases	2	30	August 30, 2024
HUMAnN (v3.6) a new db update issue - CHOCOPhlAnSGB_202103	5	60	August 30, 2024
Humann3 running indefinitely!	6	109	August 29, 2024
Installing humann3	7	99	August 29, 2024
HUMAnN database download	22	909	August 23, 2024
Humann databases need to be updated	1	147	August 23, 2024
Why bowtie2-build work single processing	5	1084	April 18, 2023
Cannot run humann v3.7 using the latest Chocophlan database	17	993	August 2, 2024

Announcing HUMAnN 4.0 (alpha)

Dear HUMAnN users: HUMAnN 4.0 (alpha) has arrived! Many thanks for your patience—we know there have been a lot of users looking forward to this release for a long time. Since a lot is changing in this version, we’re tryi…

2

331

November 4, 2024

Announcing HUMAnN 3.7

Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…