HUMAnN

Topic	Replies	Views	Activity
Announcing HUMAnN 3.7 Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…	3	2245	May 4, 2023
Humann3 Paired end reads	14	5420	October 6, 2024
Deseq2 analysis of Humann3 outputs - clarification	0	5	October 4, 2024
Functional gene normalization	0	3	October 3, 2024
Getting error "Zero gene tables were found to join." with humann_join_table	1	51	October 1, 2024
Humann_unpack_pathways command	2	153	September 25, 2024
Problems with Eggnog renaming from grouped table	2	248	September 19, 2024
HUMAnN 3.8 - How to get taxonomic results at the order level instead of genus?	2	29	September 19, 2024
Help with Understanding Microbial Community Analysis Tools	0	12	September 9, 2024
Humann_regroup_table lost uniref90_ko,uniref90_levelec	0	13	September 12, 2024
Error "The directory provided for ChocoPhlAn does not contain files of the expected format" exists after checking the location of the databases	2	22	August 30, 2024
HUMAnN (v3.6) a new db update issue - CHOCOPhlAnSGB_202103	5	36	August 30, 2024
Humann3 running indefinitely!	6	98	August 29, 2024
Installing humann3	7	89	August 29, 2024
HUMAnN database download	22	862	August 23, 2024
Humann databases need to be updated	1	139	August 23, 2024
Why bowtie2-build work single processing	5	1080	April 18, 2023
Cannot run humann v3.7 using the latest Chocophlan database	17	974	August 2, 2024
Big differences in results depending on type of mapping used?	3	31	August 2, 2024
HumanN 4 release date	17	2404	August 2, 2024
Humann output files	1	27	August 2, 2024
Trying to run Humann3 on a set of MAGs	1	14	August 2, 2024
No species identified and empty pathway files created	7	599	August 2, 2024
Identical values of different RXN number (with the same gene family)	7	242	July 24, 2024
Discrepancy in taxonomy between metaphlan and chocophlan	3	48	July 19, 2024
HuManN v4 output are different	5	115	July 18, 2024
Almost all microbes unmapped or unintegrated - Rat Stool Samples	2	32	July 17, 2024
HUMAnN and Megan comparison	1	64	July 16, 2024
No pathways identified after HUMAnN	6	114	June 25, 2024
Humann nucleotide alignment	9	126	June 24, 2024

Announcing HUMAnN 3.7

Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…