HUMAnN

Topic	Replies	Views	Activity
Release notes for HUMAnN 3.0.0 and ChocoPhlAn 201901b Hi All - HUMAnN 3.0.0 has been out in the wild for a little while now, but I was slow in getting these release notes together. Please reply with any questions. Thanks! -Eric Introduction HUMAnN 3.0.0 is a major upda…	4	300	October 14, 2021
About the Humann2 category	0	410	October 25, 2019
Humann3 database download Error	0	15	January 10, 2022
Swtiching from uniref90 to uniref 50 with only unclassified reads	0	10	January 5, 2022
Bug in humann_genefamilies genus_level	0	25	January 1, 2022
Humann3 zero species selected from prescreen	3	72	December 31, 2021
Pathway coverage issue from humann2	1	146	December 28, 2021
RAM in humann_regroup_table, etc. commands	1	25	December 22, 2021
Metatranscriptome workflow, with more than one metagenome	0	31	December 15, 2021
Getting 67% unaligned reads with HUMANnN 3.0	7	290	December 12, 2021
Time of analysis questions	2	80	December 11, 2021
Can not import biom module python 3.10	0	13	December 8, 2021
Generate pathabundance and pathcoverage only	0	27	November 29, 2021
Humann3 installation	1	61	November 26, 2021
Example for `File Type 4 (gene table) tsv` as input to HUMAnN?	1	52	November 25, 2021
Demo.fastq.gz fail to produce the result	0	26	November 25, 2021
Can we increase the percent identity threshold for metaplan when running humann3	0	28	November 20, 2021
LeFse analyis-cladogram	0	36	November 17, 2021
Profiling of marine species Alcanivorax sp N3 2A	6	98	November 11, 2021
Humann3 --search-mode problem	4	66	November 9, 2021
Discrepancy between metaphlan3 community profile and humann3 gene families	3	115	November 9, 2021
Humann3 error with metaphlan	8	137	November 8, 2021
CRITICAL ERROR: translated database uniref50_20190	4	62	November 8, 2021
HumanN2 Databases on VirtualBox VM	1	42	November 5, 2021
HUMAnN 3.0 optional and required reactions in pathway	3	119	November 5, 2021
Installing older version of humann3	1	55	November 5, 2021
Annotate predicted gene sequences	1	49	November 5, 2021
Uniref90 Gene Families to Pathways	1	73	November 5, 2021
HUMAnN3 Diamond Cannot Find tmp file	1	57	November 5, 2021
No MetaPhlAn BowTie2 database found (--index option)!	7	921	November 4, 2021

Release notes for HUMAnN 3.0.0 and ChocoPhlAn 201901b

Hi All - HUMAnN 3.0.0 has been out in the wild for a little while now, but I was slow in getting these release notes together. Please reply with any questions. Thanks! -Eric Introduction HUMAnN 3.0.0 is a major upda…