Metaphlan4 species not included in Humann3.5 output?
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3
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95
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February 6, 2023
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Using MetaPhlAn4 & HUMAnN 3.0 for mouse gut microbiome
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0
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8
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February 7, 2023
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Metaphlan V4.0.2 and Huma 3.6: MetaPhlAn taxonomic profile provided was not generated with the expected database
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14
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282
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February 6, 2023
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Humann for soil metagenomics
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1
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17
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February 6, 2023
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No MetaPhlAn BowTie2 database found (--index option)!
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22
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3463
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February 6, 2023
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Got "local variable 'MINimum' referenced before assignment" while running
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1
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37
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January 24, 2023
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What is about the new pathcoverage
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3
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156
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January 24, 2023
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Normalization method and when the microorganism to be reported does not exist
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1
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33
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January 24, 2023
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Availabilty of mapping NCBI TaxID to Species name
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4
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37
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January 24, 2023
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Low mapping rates, humann, shallow shotgun
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2
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71
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January 24, 2023
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Error in demo code, can-not-find-file-metaphlan-bugs-list?
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1
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29
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January 24, 2023
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Humann uses outdated uniref50 mapping file for mapping Uniref50 ids to names by default
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2
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50
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January 24, 2023
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Transform pathway result
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2
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44
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January 24, 2023
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Add ncbi TaxID to Humann3 output
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1
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1025
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January 24, 2023
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Humann3 Paired end reads
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7
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2235
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January 24, 2023
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Any HUMANN databases specifically designed for marine habitats?
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1
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36
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January 24, 2023
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utf-8 decode error while running humann_join_tables: reading hidden files on osx
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1
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26
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January 24, 2023
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Marine Samples (Environmental samples) and disk space
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1
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68
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January 24, 2023
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Obtain the pathway abundance file for some specific EC
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1
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78
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January 24, 2023
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HUMANN 3.0 function downstream analysis
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3
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317
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January 16, 2023
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Humann3 metatranscriptome analysis stuck at nucleotide alignment post processing
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10
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151
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January 9, 2023
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Humann 3.6 --resume
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2
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101
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December 15, 2022
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No MetaPhlAn BowTie2 database found (--index option)! Humann3.6
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4
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233
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December 15, 2022
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Problems running HUMAnN3.6 - MetaPhlan database error
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1
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111
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December 15, 2022
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Mapping MetaCyc Pathways
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5
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117
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December 15, 2022
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Humann2_regroup_table for kegg : UNGROUPED!
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3
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101
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December 15, 2022
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One-to-many problem with humann2_regroup_table
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8
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1049
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December 5, 2022
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What is humann doing in the circled area?
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7
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197
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December 1, 2022
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Humann3/Chocophlan and metaphlan3 databases compatible?
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4
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422
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December 1, 2022
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Humann2 input tsv file format
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1
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53
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December 1, 2022
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