HUMAnN

Topic	Replies	Views	Activity
Announcing HUMAnN 3.7 Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…	3	280	May 4, 2023
Humann3 Paired end reads	8	2601	May 28, 2023
Humann_barplot: sample label	0	12	May 25, 2023
What version of MetaCyc pathways database is used in HUMAnN 3.6/3.7	1	38	May 22, 2023
Chocophlan inclusion criteria	3	47	May 22, 2023
Issue installing Humann3 via conda	2	36	May 17, 2023
Dropbox Error with Metaphlan while running tutorial for Humann	1	45	May 12, 2023
Upgrading to more recent Uniref databases for Humann3	7	332	May 11, 2023
How to do CAZy gene profiling?	8	596	May 9, 2023
Humann3 only generated temp folder and no 3 main output files	2	60	May 7, 2023
No species identified and empty pathway files created	4	109	May 4, 2023
MetaPhlan Database	6	114	May 4, 2023
Humann3 => only unclassified results \| but not with humann2	3	93	May 4, 2023
Humann3 empty output	1	53	May 4, 2023
Humann biocontainer: Unable to write to the HUMAnN config file	2	128	May 4, 2023
CRITICAL ERROR: The directory provided for ChocoPhlAn does not contain files of the expected format (ie '^[g__][s__]')	3	2055	May 4, 2023
Humann3: tax profile parsing error is a bit misleading	2	38	May 1, 2023
CRITICAL ERROR: Error executing: blastx diamond	1	71	April 28, 2023
Eggnog version in humann_regroup_table function	1	81	April 21, 2023
High unmapped abundance in Humann3	4	205	April 20, 2023
Why bowtie2-build work single processing	5	440	April 18, 2023
Metaphlan V4.0.2 and Huma 3.6: MetaPhlAn taxonomic profile provided was not generated with the expected database	30	1198	April 15, 2023
Identified engineered pathway from human gut microbiome data	1	87	April 14, 2023
HUMANn database	1	86	April 13, 2023
Bowtie2 index of full_chocophlan database	1	142	March 30, 2023
Biom file not recognized in HUMAnN	1	68	April 11, 2023
How can I get taxa relative abundances from HUMAnN?	0	71	April 8, 2023
CRITICAL ERROR: The diamond executable can not be found. Please check the install	0	133	April 7, 2023
Humann3 / Missing pick-frames option	1	64	April 6, 2023
Problem installing humann2	6	1267	April 5, 2023

Announcing HUMAnN 3.7

Summary: HUMAnN 3.7 enables tiered search using MetaPhlAn 4’s recently updated marker database (October 2022 version) and the bioBakery 3.1 pangenome catalog. What has changed in HUMAnN 3.7: HUMAnN 3.7 maps MetaPhl…