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About the Humann2 category
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0
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266
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October 25, 2019
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Custom databases usage
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0
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8
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March 2, 2021
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CRITICAL ERROR: Can not find file metaphlan_bugs_list.tsv
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4
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20
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March 3, 2021
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Humann3 Paired end reads
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4
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282
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March 3, 2021
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HUMANN2 / HUMANN2 ground truth values
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3
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44
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March 2, 2021
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No MetaPhlAn BowTie2 database found (--index option)!
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3
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28
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March 1, 2021
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Percentage mapped reads in RPK or raw read count?
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1
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11
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March 1, 2021
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Humann 3.0 and bowtie metaphlan output
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3
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365
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March 1, 2021
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Version for grouping databases
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1
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11
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February 26, 2021
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Eggnog ID in uniref_eggnog but not map_eggnog_names
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4
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88
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February 26, 2021
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Synthetic human gut metagenome
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2
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27
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February 23, 2021
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Is it necessary to run trimmomatic before HUMAnN? My read number decreased from around 10000000 to 7000000 in forward read and 2000000 in reverse read
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11
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346
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August 29, 2020
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Is long computation time in humann3 related to not using knead data?
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1
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32
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February 18, 2021
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Obtain $sample_genefamilies.tsv not normalized by RPKs
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3
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37
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February 2, 2021
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Prescreen results in no species selected when "-t marker_ab_table"
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2
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23
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February 2, 2021
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HUMAnN v3 joint taxonomic profile
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2
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372
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February 1, 2021
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The diamond executable can not be found
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0
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21
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January 30, 2021
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Custom UniRef90 database with Humann3
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2
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38
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January 29, 2021
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Chocophlan to UniRef90 map
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2
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27
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January 29, 2021
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Smoothing DNA-level features to avoid divide-by-zero errors
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3
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35
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January 29, 2021
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Low percentage of aligned reads
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17
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1208
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January 29, 2021
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Deciding how the genefamilies table is produced
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2
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35
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January 25, 2021
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Kegg on Humann2
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13
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1118
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January 25, 2021
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Can I run output from Illumina genome Analyser II, IIx and Illumina Hiseq 2000 with MetaPhlAn and HUMAnN and compare the output?
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1
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35
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January 25, 2021
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Humann2_renorm_table
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3
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216
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January 25, 2021
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Metaphlan2 is available, but humann2 has errors
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2
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107
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January 23, 2021
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How do I get the v30 database?
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1
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38
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January 22, 2021
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Diamond 0.9.24 SIGABRT: 6
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3
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44
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January 18, 2021
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Error while running minpath, one sample only
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4
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44
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January 14, 2021
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Humann3 log output error
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1
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60
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January 13, 2021
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