I am using humann version 3.8
I am trying to determine which gene corresponds to each pathway in my pathways.tsv file.
I am running the following command: humann_unpack_pathways --input-genes Name1.genefamilies.tsv --input-pathways Name1.pathabundance.tsv --output Name1_Pathway_genes.tsv
It seems to assign the gene correctly, however, numbers for RPK are only showing up for one of my samples, while the remaining samples are blank.
What can I do to fix this?