Matching tools and database versions

Microbial community profiling HUMAnN
1

Hi,

I’m new to BioBakery and I’m finding it a bit challenging to identify the correct and compatible versions of MetaPhlAn, HUMAnN, and their associated databases.

Could you share how you typically manage version compatibility? Is there a reference list or resource that outlines which versions work best together?

Thank you very much for your time and support!

Best,

Matthieu

3

Thanks @Gsmith535 for the comments. We have been monitoring this issue and are working on a software/database version compatibility table that we will post as a pinned comment soon. We’re also working on new MetaPhlAn and HUMAnN releases that will do a better job of checking/enforcing those requirements during install and at runtime.

1 Like
4

Thanks for the quick follow up, that would be super! I appreciate the effort you all are investing to develop these tools, manage databases, and document as changes occur.

5

Thanks a lot for your help.

6

Looking forward to thos software/database.
Thanks Eric