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About the PanPhlAn category
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0
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386
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December 13, 2019
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Inconsistent Format for Gene Start Positions in PanPhlAn Database
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8
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77
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June 15, 2022
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Missing samples - panphlan_profiling.py
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1
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43
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May 31, 2022
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Coverage Thresholds
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1
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44
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May 31, 2022
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Tutorial; guidance on vizualisation
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4
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470
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May 19, 2022
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Duplicate entries in the contigs
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0
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62
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May 13, 2022
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Paired end fastq files as input for PanPhlAn
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2
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54
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May 6, 2022
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Missing sample from the panphlan profile step
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9
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56
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April 28, 2022
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Problems with panphlan_map.py
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6
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181
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April 22, 2022
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Pangenome generation
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8
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889
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April 12, 2022
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Finding out which genes drive varation seen between conditions
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4
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105
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February 10, 2022
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Panphlan Profiling Error
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3
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102
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December 6, 2021
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Multiple interrelated species (Streptococci) [reposting]
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3
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156
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November 30, 2021
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Minimum depth for PanPhlAn
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9
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132
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November 8, 2021
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Panphlan reference input
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1
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214
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November 8, 2021
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Appended headers in panphlan annotation files
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3
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125
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August 27, 2021
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Script for visualisation - BioBakery paper (Beghinin, 2021)
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1
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207
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August 5, 2021
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Input for Panphlan
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2
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186
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July 22, 2021
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PanPhlAn Identifier to Uniprot
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2
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180
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July 12, 2021
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Problem with panphlan_map
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3
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218
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June 2, 2021
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Include Genome Sequences in PanPhlAn3
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3
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298
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April 26, 2021
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PanPhlAn_pangenome_exporter uniref uniref_annotator diamond issue
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6
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292
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April 14, 2021
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PanPhlAn threshold selection
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6
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628
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March 25, 2021
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Panphlan duplicate sequences
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2
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211
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March 15, 2021
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PanPhlAn_pangenome_exporter issue while writing .tsv
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7
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296
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January 25, 2021
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Meet "OSError: Invalid data stream" when using panphlan_profiling.py
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0
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511
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November 14, 2020
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Samtools failure "[mpileup] fail to read the header of /tmp/panphlan_nprq80h8.bam"
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14
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2435
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November 3, 2020
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Installation problem
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3
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512
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September 9, 2020
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Track unknown strains PanPhlan3
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1
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310
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July 10, 2020
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Am I doing it right...?
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2
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606
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July 8, 2020
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