|
Humans database
|
|
15
|
438
|
June 13, 2025
|
|
Reaction to Pathways
|
|
1
|
52
|
June 13, 2025
|
|
[e] No alignments found to concatenate
|
|
4
|
583
|
June 13, 2025
|
|
MetaPhlAn Databases
|
|
1
|
33
|
June 13, 2025
|
|
HUMAnN 3.8 - How to get taxonomic results at the order level instead of genus?
|
|
4
|
77
|
June 13, 2025
|
|
MetaPhlAn 4.2.2 release (initial long-read sequencing support and database update)
|
|
2
|
720
|
June 11, 2025
|
|
Mamba installation
|
|
1
|
143
|
June 11, 2025
|
|
Mock Community & Gut Microbiome Benchmarking
|
|
2
|
52
|
June 10, 2025
|
|
MetaPhlan4 drastically underestimate the abundance of Bacillus_subtilis|t__SGB7788
|
|
6
|
520
|
June 10, 2025
|
|
Metaphlan: sgb_to_gtdb_profile.py fails with KeyError
|
|
1
|
25
|
June 10, 2025
|
|
Understanding RPK values
|
|
3
|
70
|
June 9, 2025
|
|
Metaphlan3 relative abundance
|
|
14
|
7047
|
June 9, 2025
|
|
Maaslin3 summary plot
|
|
1
|
48
|
June 7, 2025
|
|
Structured Clinical Data in IBDMDB
|
|
0
|
14
|
June 4, 2025
|
|
Maaslin3 error message
|
|
1
|
20
|
June 3, 2025
|
|
"The page you are looking for is not found" Error
|
|
8
|
76
|
June 3, 2025
|
|
Pseudocount application in Maaslin2 vs Maaslin3
|
|
2
|
30
|
June 2, 2025
|
|
Maaslin3 filtering out different features to Maaslin2
|
|
2
|
41
|
June 2, 2025
|
|
MACARRoN Capacity to Perform Differential Abundance Testing
|
|
1
|
17
|
June 2, 2025
|
|
Output Depends on Read Order Due to Ambiguous Protein Length Assignment in `blastx_coverage()`
|
|
2
|
37
|
June 1, 2025
|
|
Maaslin3 summary plot shape change
|
|
2
|
68
|
May 30, 2025
|
|
Can I use the option --bowtie2out (for StrainPhlan!) along HUMANn?
|
|
3
|
57
|
May 29, 2025
|
|
Batch correction for microbiome data
|
|
0
|
20
|
May 29, 2025
|
|
MaAsLin2 for Differential Abundance Analysis in a Repeated Measures Microbiome Study with Multiple Covariates
|
|
1
|
41
|
May 28, 2025
|
|
Pairwise comparisons for interaction terms in maaslin3
|
|
8
|
142
|
May 28, 2025
|
|
MaAsLin2 with non-clinical data and small samples
|
|
12
|
110
|
May 28, 2025
|
|
Humann database errors (a short novel)
|
|
10
|
323
|
May 20, 2025
|
|
HUMAnN 3.9 fails when using '-t' flag with MetaPhlAn >4.0.6
|
|
0
|
34
|
May 19, 2025
|
|
Error in merge_metaphlan_tables.py
|
|
1
|
31
|
May 19, 2025
|
|
HUMAnN 3.9: Low percentage in “Selected species explain X% of predicted community composition”
|
|
2
|
25
|
May 19, 2025
|