Humans database

Microbial community profiling HUMAnN
1

hello, I have difficulty downloading the humann database:
humann_databases --download chocophlan full /lustre04/scratch/zhangbin/chocophlan2/chocophlan --update-config yes
Download URL: http://huttenhower.sph.harvard.edu/humann_data/chocophlan/full_chocophlan.v201901_v31.tar.gz
CRITICAL ERROR: Unable to download and extract from URL: http://huttenhower.sph.harvard.edu/humann_data/chocophlan/full_chocophlan.v201901_v31.tar.gz
I am also confused, isn’t vOct22 the newest one? can humann v3.8 and metaphlan v4.0.6 (1 Mar 2023) still support this v201901 database?

2

Have the same problem, database files seem to be not accessible. Would be nice to get an approximation when that might work again.

Such as http://huttenhower.sph.harvard.edu/humann_data/uniprot/uniref_annotated/uniref90_DEMO_diamond_v201901b.tar.gz or

3

Update: seems to work or me now again.

4

Thanks for the updates here. We’ve been doing work behind the scenes to try to make the downloads faster and more stable, but there might be some growing pains in that effort. Let us know if things aren’t working!