Calculating pathway abundances from modified RXN/UniRef90 files
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1
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30
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November 8, 2024
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Humann/MetaPhlAn - The metaphlan executable can not be found
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4
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63
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November 7, 2024
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Humann error concerning metaphanand databases
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2
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81
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November 4, 2024
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KEGG Orthogroups count output
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2
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35
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October 31, 2024
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Deseq2 analysis of Humann3 outputs - clarification
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3
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97
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October 30, 2024
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Humann3 Paired end reads
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19
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5831
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October 30, 2024
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High Percentage of Unmapped and Unintegrated Reads in HUMAnN3 Analysis
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2
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90
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October 30, 2024
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How to convert MetaCyc pathway PWY into UniProt90 identifiers
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1
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58
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October 30, 2024
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No_name after humann_rename_table
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1
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26
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October 30, 2024
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Humann_unpack_pathways command
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4
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196
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October 18, 2024
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Humann3 humann_renorm_table output downstream analysis
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6
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100
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October 17, 2024
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Problems with Eggnog renaming from grouped table
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6
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290
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October 11, 2024
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Humann_regroup_table lost uniref90_ko,uniref90_levelec
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1
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55
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October 11, 2024
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Help with Understanding Microbial Community Analysis Tools
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1
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48
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October 11, 2024
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Functional gene normalization
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1
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59
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October 11, 2024
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Getting error "Zero gene tables were found to join." with humann_join_table
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1
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68
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October 1, 2024
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Error "The directory provided for ChocoPhlAn does not contain files of the expected format" exists after checking the location of the databases
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2
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44
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August 30, 2024
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HUMAnN (v3.6) a new db update issue - CHOCOPhlAnSGB_202103
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5
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107
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August 30, 2024
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Humann3 running indefinitely!
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6
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151
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August 29, 2024
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Installing humann3
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7
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136
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August 29, 2024
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Humann databases need to be updated
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1
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182
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August 23, 2024
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Why bowtie2-build work single processing
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5
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1109
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April 18, 2023
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Cannot run humann v3.7 using the latest Chocophlan database
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17
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1122
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August 2, 2024
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Big differences in results depending on type of mapping used?
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3
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64
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August 2, 2024
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HumanN 4 release date
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17
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2653
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August 2, 2024
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Humann output files
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1
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65
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August 2, 2024
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Trying to run Humann3 on a set of MAGs
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1
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24
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August 2, 2024
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No species identified and empty pathway files created
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7
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644
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August 2, 2024
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Identical values of different RXN number (with the same gene family)
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7
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251
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July 24, 2024
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Discrepancy in taxonomy between metaphlan and chocophlan
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3
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69
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July 19, 2024
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