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MetaPhlAn 4.2.2 work with humann v3.0.1
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8
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469
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October 22, 2025
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Using Kraken2 with Humann3
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5
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724
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October 8, 2025
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Problems running Humann
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2
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129
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September 25, 2025
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ERROR: The MetaPhlAn taxonomic profile provided was not generated with the expected database version. Please update your version of MetaPhlAn to at least v3.0
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1
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206
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September 25, 2025
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MetaPhlAn / CHOCOPhlAn version mismatch while doing humann 3 analysis
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1
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116
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September 23, 2025
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Can't load databases
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3
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102
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September 23, 2025
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Errors with humann-metaphlan
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2
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197
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September 23, 2025
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Ultima sequencing with BioBakery tools
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1
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46
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September 19, 2025
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HUMAnN 4.2 for long read data
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7
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261
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September 6, 2025
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Missing relative abundance and coverage error for humann4a
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2
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175
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August 29, 2025
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Humann v3.8 misinterprets non-default analysis types, ie "-t rel_ab_w_read_stats", results from metaphlan 4.1
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4
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132
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August 28, 2025
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Metaphlan-informed taxonomic stratification and its discrepancies with unirefids
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2
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102
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August 27, 2025
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Are humann_regroup_table (utility_mapping) command and flag –utility-database in HUMANnN v4.0.0.alpha.1 doing the same thing?
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2
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139
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August 28, 2025
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Statistical Approach for Comparing Functional Potential of Selected SGBs vs. Community Background
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3
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101
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August 28, 2025
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Humann3 Paired end reads
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20
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6684
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August 27, 2025
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HUMAnN - Pathway contribution data
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1
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100
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August 27, 2025
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HUMAnN MinPath drastically reducing pathway counts and inconsistent results
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1
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83
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August 27, 2025
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Humann ERROR: Metaphlan is trying to edit the database folder directly
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1
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64
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August 27, 2025
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HUMAnN installs for Python 3.12 in a Python 3.13 environment
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1
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207
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August 27, 2025
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Inconsistent species-level contributions to pathways across runs with identical inputs
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3
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71
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August 27, 2025
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Uniref90 Gene Families to Pathways
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8
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1366
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August 27, 2025
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Thoughts on custom humann3 reference databases
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9
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2066
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August 27, 2025
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HUMAnN pathway coverage: community total ≪ species coverage. Why can this happen?
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2
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154
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August 27, 2025
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Humann2:"The condensed distance matrix must contain only finite values" when barplotting
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2
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1705
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August 19, 2025
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The number of humann genefamiles much more than read gene number
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2
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65
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August 16, 2025
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Getting humann and metaphlan to integrate
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0
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515
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August 6, 2025
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Question on Running HUMAnN4 with Limited Memory on HPC
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3
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214
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August 1, 2025
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Database size of humann
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2
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141
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August 1, 2025
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Normalization method at HUMAnN4a output
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4
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353
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August 1, 2025
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Compatibility of metaphlan4.0.3 output with human3.9
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1
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300
|
August 1, 2025
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