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Humann3 only generated temp folder and no 3 main output files
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5
|
416
|
June 20, 2024
|
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What is the approximate running time of a sample and how to reduce the running time
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1
|
121
|
June 20, 2024
|
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HUMAnN Parameters not work for bowtie2 and diamond
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|
1
|
95
|
June 20, 2024
|
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Humann3: Utility mapping databases unavailable
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|
12
|
1284
|
June 20, 2024
|
|
What metaphlan 4.1 output shoud I use as input for humann 3.9?
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1
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131
|
June 20, 2024
|
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Inquiry of the usage of metacyc database in humann2/3
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1
|
45
|
June 20, 2024
|
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Mapping KOs to Uniref90 in humann3
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1
|
123
|
June 20, 2024
|
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CRITICAL: Can not find file sample_616_metaphlan_bugs_list.tsv
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3
|
251
|
June 20, 2024
|
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Uniref90 and MetaCyc database versions and dates
|
|
12
|
2376
|
June 29, 2022
|
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MinPath12hmp.py generates an error and Pathways are not created
|
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0
|
50
|
May 29, 2024
|
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Humann v3.9 sam file input error
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1
|
76
|
May 10, 2024
|
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Help with understanding identifier mappings for HUMAnN?
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2
|
116
|
May 3, 2024
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Humann with the latest version of metaphlan4
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5
|
436
|
May 2, 2024
|
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Humann 3.9 Demo file results
|
|
0
|
75
|
May 2, 2024
|
|
HUMAnN for Low Biomass Scenario
|
|
0
|
68
|
April 30, 2024
|
|
Only e.coli detected
|
|
5
|
774
|
April 30, 2024
|
|
Metaphlan V4.0.2 and Huma 3.6: MetaPhlAn taxonomic profile provided was not generated with the expected database
|
|
33
|
4435
|
April 29, 2024
|
|
No species found from stool.fasta file in HUMAnN tutorial
|
|
1
|
93
|
April 26, 2024
|
|
CRITICAL ERROR: The directory provided for ChocoPhlAn contains files ( alaS.centroids.v201901_v31.ffn.gz ) that are not of the expected version
|
|
2
|
204
|
April 23, 2024
|
|
Bowtie2 Could not open bowtie2_aligned.sam
|
|
2
|
118
|
April 17, 2024
|
|
HUMAnN3 analysis not proceeding with RNAseq data
|
|
2
|
186
|
April 15, 2024
|
|
CRITICAL ERROR: The metaphlan executable can not be found. Please check the install
|
|
1
|
155
|
April 11, 2024
|
|
Way to identify virus in humann3 with metaphlan?
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|
1
|
116
|
April 11, 2024
|
|
Metatranscriptomics of enriched cultures from a stool
|
|
1
|
101
|
April 11, 2024
|
|
Does Genefamilies, Pathabundance and pathcoverage work with split reads?
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|
1
|
88
|
April 11, 2024
|
|
Most results from humann3 unclassified
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|
1
|
140
|
April 11, 2024
|
|
EC numbers and bacteria
|
|
1
|
110
|
April 11, 2024
|
|
CRITICAL ERROR: The directory provided for ChocoPhlAn contains files that are not of the expected version
|
|
5
|
1238
|
August 18, 2023
|
|
Inconsistent pathway stratification
|
|
4
|
238
|
March 11, 2024
|
|
Not able to upgrade HumanN to version 3.9
|
|
6
|
213
|
March 7, 2024
|