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Humann3 Paired end reads
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20
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6456
|
August 27, 2025
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HUMAnN - Pathway contribution data
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1
|
83
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August 27, 2025
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HUMAnN MinPath drastically reducing pathway counts and inconsistent results
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1
|
74
|
August 27, 2025
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Humann ERROR: Metaphlan is trying to edit the database folder directly
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1
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37
|
August 27, 2025
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HUMAnN installs for Python 3.12 in a Python 3.13 environment
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1
|
124
|
August 27, 2025
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Inconsistent species-level contributions to pathways across runs with identical inputs
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3
|
53
|
August 27, 2025
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Uniref90 Gene Families to Pathways
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8
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1249
|
August 27, 2025
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Thoughts on custom humann3 reference databases
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9
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2012
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August 27, 2025
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How to get count data (not RPK)?
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1
|
100
|
August 27, 2025
|
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HUMAnN pathway coverage: community total ≪ species coverage. Why can this happen?
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2
|
98
|
August 27, 2025
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Humann2:"The condensed distance matrix must contain only finite values" when barplotting
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2
|
1685
|
August 19, 2025
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The number of humann genefamiles much more than read gene number
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2
|
50
|
August 16, 2025
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Getting humann and metaphlan to integrate
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0
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431
|
August 6, 2025
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Question on Running HUMAnN4 with Limited Memory on HPC
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3
|
164
|
August 1, 2025
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Database size of humann
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|
2
|
101
|
August 1, 2025
|
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Normalization method at HUMAnN4a output
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4
|
282
|
August 1, 2025
|
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Compatibility of metaphlan4.0.3 output with human3.9
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|
1
|
235
|
August 1, 2025
|
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Humann 4 alpha and DIAMOND
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|
1
|
116
|
August 1, 2025
|
|
HUMAnN 4(Alpha) less pathway generated and database filtering
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|
3
|
328
|
August 1, 2025
|
|
Has the human3 database been updated?
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|
1
|
87
|
August 1, 2025
|
|
HUMANn 4 + MetaPhlAn 4
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|
7
|
1171
|
July 27, 2025
|
|
Error when running HUMAnN tutorial
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|
2
|
153
|
July 25, 2025
|
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Questions on handling genefamilies files
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|
2
|
98
|
July 24, 2025
|
|
Using humann4 with metaphlan4.2.2 profiles
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|
4
|
162
|
July 23, 2025
|
|
Unable to Download utility_mapping Full Database
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|
4
|
196
|
July 23, 2025
|
|
Only ~3% of UniRef90 gene families are regrouped to KO in HUMAnN3 — advice appreciated
|
|
1
|
95
|
July 23, 2025
|
|
HUMAnN 4.0.0.alpha.1 calls "old" metaphlan command-line args
|
|
1
|
197
|
June 30, 2025
|
|
Humann 4 cant work with metaphlan 4
|
|
1
|
548
|
June 30, 2025
|
|
CRITICAL: Can not find file sample_616_metaphlan_bugs_list.tsv
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|
5
|
378
|
June 30, 2025
|
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Connect Pathways to Uniref90 Gene Families IDs to Gene Families
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|
2
|
225
|
June 20, 2025
|