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Humann 4 alpha and DIAMOND
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1
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132
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August 1, 2025
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HUMAnN 4(Alpha) less pathway generated and database filtering
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3
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440
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August 1, 2025
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Has the human3 database been updated?
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1
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116
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August 1, 2025
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HUMANn 4 + MetaPhlAn 4
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7
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1348
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July 27, 2025
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Error when running HUMAnN tutorial
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2
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184
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July 25, 2025
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Questions on handling genefamilies files
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2
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132
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July 24, 2025
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Using humann4 with metaphlan4.2.2 profiles
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4
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207
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July 23, 2025
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Unable to Download utility_mapping Full Database
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4
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252
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July 23, 2025
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Only ~3% of UniRef90 gene families are regrouped to KO in HUMAnN3 — advice appreciated
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1
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146
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July 23, 2025
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HUMAnN 4.0.0.alpha.1 calls "old" metaphlan command-line args
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1
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233
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June 30, 2025
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Humann 4 cant work with metaphlan 4
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1
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647
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June 30, 2025
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CRITICAL: Can not find file sample_616_metaphlan_bugs_list.tsv
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5
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421
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June 30, 2025
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Connect Pathways to Uniref90 Gene Families IDs to Gene Families
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2
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301
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June 20, 2025
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Question About HUMAnN Output Filtering for SGB-Level Contributions
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1
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62
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June 20, 2025
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Combine metaphlan and humann
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2
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150
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June 15, 2025
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Humans database
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15
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641
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June 13, 2025
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Reaction to Pathways
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1
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203
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June 13, 2025
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HUMAnN 3.8 - How to get taxonomic results at the order level instead of genus?
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4
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144
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June 13, 2025
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Understanding RPK values
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3
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292
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June 9, 2025
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Output Depends on Read Order Due to Ambiguous Protein Length Assignment in `blastx_coverage()`
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2
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86
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June 1, 2025
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Can I use the option --bowtie2out (for StrainPhlan!) along HUMANn?
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3
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122
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May 29, 2025
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Humann database errors (a short novel)
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10
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870
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May 20, 2025
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HUMAnN 3.9 fails when using '-t' flag with MetaPhlAn >4.0.6
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0
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74
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May 19, 2025
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HUMAnN 3.9: Low percentage in “Selected species explain X% of predicted community composition”
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2
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126
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May 19, 2025
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Large percentage of unmapped pathways,
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4
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136
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May 16, 2025
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Humann 4.0 alpha in workflow
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5
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339
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May 16, 2025
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HUMAnN - RuntimeError: can't allocate lock
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2
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77
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April 23, 2025
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Humann3 without prior metaphlan run
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4
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270
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April 21, 2025
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Install and running Humann for the first time
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2
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113
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April 18, 2025
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What are typical unmapped and unintegrated fractions
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1
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195
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April 11, 2025
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