Hi,
I’m trying to download utility mapping databases to be used with the humann_regroup script.
Currently, I’m running humann 3.
But I keep getting the following error when trying to download the mapping dbs.
“Creating subdirectory to install database: /scratch/hasitha/WaterProject/Metagenome/Humann2_files/MappingFiles/utility_mapping
Download URL: http://huttenhower.sph.harvard.edu/humann2_data/full_mapping_v201901.tar.gz
CRITICAL ERROR: Unable to download and extract from URL: http://huttenhower.sph.harvard.edu/humann2_data/full_mapping_v201901.tar.gz”
Below is the command I used:
“[hasitha@pete ~]$ humann_databases --download utility_mapping full /scratch/hasitha/WaterProject/Metagenome/Humann2_files/MappingFiles”
Then I went through this forum and tried using the suggestion to download using wget, but to no avail. Below is the error I got.
[hasitha@pete ~]$ wget “http://huttenhower.sph.harvard.edu/humann2_data/full_mapping_v201901.tar.gz -p /scratch/hasitha
–2021-04-12 23:51:04-- http://huttenhower.sph.harvard.edu/humann2_data/full_mapping_v201901.tar.gz
Resolving huttenhower.sph.harvard.edu (huttenhower.sph.harvard.edu)… 140.247.151.38
Connecting to huttenhower.sph.harvard.edu (huttenhower.sph.harvard.edu)|140.247.151.38|:80… connected.
HTTP request sent, awaiting response… 404 Not Found
2021-04-12 23:51:04 ERROR 404: Not Found.”
Would greatly appreciate if someone can mirror the mapping databases to an accessible location and provide the new url.
Thank you very much.
Best Rgds,
Hasitha.