|
best strategy for analyzing functional changes over time
|
|
1
|
47
|
June 5, 2026
|
|
Longitudinal analysis using Maaslin3
|
|
9
|
114
|
June 5, 2026
|
|
HUMAnN4 Support for MetaPhlAn vJan25 Database
|
|
2
|
205
|
June 4, 2026
|
|
Error running MaAsLin3 for genus level data only
|
|
1
|
20
|
June 3, 2026
|
|
Announcing WAAFLE 1.5
|
|
2
|
123
|
June 3, 2026
|
|
Troubles with xtfrm.data.frame
|
|
7
|
42
|
June 1, 2026
|
|
Custom MetaPhlAn subspecies taxonomy + corresponding HUMAnN ChocoPhlAn pangenome design
|
|
2
|
35
|
May 28, 2026
|
|
Everything is unclassified
|
|
4
|
53
|
May 28, 2026
|
|
Metaphlan 4.2.4: TypeError: stat: path should be string, bytes, os.PathLike or integer, not NoneType
|
|
2
|
34
|
May 27, 2026
|
|
Question regarding normalization method for rarefied 16S ASV data ("TSS" vs "NONE")
|
|
1
|
29
|
May 27, 2026
|
|
Versions of datasets which are compatible with the latest docker image
|
|
0
|
13
|
May 26, 2026
|
|
Getting split reads from MetaPhlAn 4.2.4?
|
|
0
|
23
|
May 26, 2026
|
|
Downloading metaphlan4 SGB genomes
|
|
9
|
505
|
May 25, 2026
|
|
Difference in sequencing depth
|
|
3
|
81
|
May 25, 2026
|
|
Total Bacteria species relative abundance no longer sums to 1 after converting the SGB profile to GTDB
|
|
18
|
1489
|
May 24, 2026
|
|
Biobakery_workflows v4.0.0a1 uses deprecated HUMAnN UniRef build name (uniref90_diamond)
|
|
0
|
16
|
May 24, 2026
|
|
HUMAnN v4 alpha: clarification on 0.5x coverage threshold and low-abundance taxa filtering
|
|
1
|
38
|
May 22, 2026
|
|
Strain taxonomic level Identification
|
|
4
|
182
|
May 22, 2026
|
|
SGB Newick file labels
|
|
3
|
87
|
May 22, 2026
|
|
MetaPhlAn4 (mpa_vJun23_CHOCOPhlAnSGB_202307): unexpected behavior with fix_relab_mpa4.py
|
|
6
|
73
|
May 22, 2026
|
|
Beta diversity in metaphlan 4.2.4 doesn't work becuase of rbiom upgrade?
|
|
1
|
26
|
May 22, 2026
|
|
Correupt bowtie2 index file? metaphlan error
|
|
1
|
33
|
May 22, 2026
|
|
Adapter detection
|
|
2
|
50
|
May 18, 2026
|
|
Humann4 conda install from release note
|
|
1
|
75
|
May 14, 2026
|
|
Nanopore long-reads analysis with Metaphlan4.2.2
|
|
0
|
28
|
May 12, 2026
|
|
Reliability of MaAsLin3 with small sample sizes
|
|
1
|
61
|
May 11, 2026
|
|
Reference level changes lead to different pairwise differential abundance results in Maaslin3
|
|
1
|
24
|
May 11, 2026
|
|
Mismatched reads
|
|
1
|
16
|
May 11, 2026
|
|
mpa_vJan25_CHOCOPhlAnSGB_202503.fna not downloaded in the .tar file
|
|
2
|
107
|
May 11, 2026
|
|
Maaslin 3 package versioning
|
|
2
|
52
|
May 7, 2026
|