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Filtering settings StrainPhlAn 4.1
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8
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20
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February 26, 2025
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Qval not displayed
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0
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10
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February 24, 2025
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Trouble with Arguments and Time it Takes to Make Tree
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0
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6
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February 24, 2025
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Errors in masaslin3 presence/absence results
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2
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47
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February 24, 2025
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Duplicate Species Entries with and without SGB Annotation
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0
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11
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February 22, 2025
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Maaslin3 Memory Consumption during Logistic/Prevalence Abundance
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6
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20
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February 21, 2025
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Kneaddata - a non very explicit error message
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4
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1341
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February 19, 2025
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Duplicate-like Reaction Entries with Identical CPM Values in HUMAnN Output
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4
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10
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February 19, 2025
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How to include other subclades/taxa in the resulting plot?
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1
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28
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February 18, 2025
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Database issues with humann3 and metaphlan
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1
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46
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February 13, 2025
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Plot_tree_graphlan
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0
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7
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February 15, 2025
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Multiple reference genomes not in the output tree
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4
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893
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March 26, 2021
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Sample2markers don't generate any pkl files, but instead generate json.bz2 files
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6
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201
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February 14, 2025
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increasing the default parameter `threads` value
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1
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7
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February 13, 2025
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HUMAnN database download
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25
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1107
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February 13, 2025
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Pathway abundance file only includes 9 species
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1
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19
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February 13, 2025
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Error with the examples files
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1
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24
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February 13, 2025
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Error running metaphlan and humann
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2
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56
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February 13, 2025
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HUMAnN: Unable to convert gene table value to float
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1
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9
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February 13, 2025
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Clarification on HUMAnN taxonomy assignment beyond MetaPhlAn
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1
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21
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February 13, 2025
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Humann results have some gene families not in map_uniref90_name.txt
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1
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9
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February 13, 2025
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How to create a nested random effect in maaslin3
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8
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57
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February 12, 2025
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HUMAnN3: single-end reads equal to 50 bp, resulting in zero species
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0
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13
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February 11, 2025
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MaAsLin3 total abundance scaling with basic 16S qPCR
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1
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19
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February 10, 2025
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Explanation of the output of phylophlan_metagenomic
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3
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932
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February 10, 2025
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bioBakery workflows (wmgx) failing tasks
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0
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7
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February 10, 2025
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How to get strainphlan4 corresponding image installation mode?
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0
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5
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February 6, 2025
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groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`
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7
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830
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February 6, 2025
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Wmgx_wmgt ERROR: task 17
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0
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6
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February 6, 2025
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The output of KneadData differs when threads are used
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3
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33
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February 6, 2025
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