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Random effect participant ID - categorical
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2
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10
|
July 16, 2025
|
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Questions on handling genefamilies files
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0
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4
|
July 15, 2025
|
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Error when running HUMAnN tutorial
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0
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4
|
July 14, 2025
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Calculate alpha diversity before or after filtering?
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0
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8
|
July 14, 2025
|
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Trouble installing MelonnPan
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0
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5
|
July 10, 2025
|
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HUMAnN 4(Alpha) less pathway generated and database filtering
|
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0
|
22
|
July 10, 2025
|
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Discrepancy Between Input Reads and Estimated Read Counts in MetaPhlAn 4
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3
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30
|
July 10, 2025
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Zero filtering of custom Log Ratio data for MaAsLin3
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4
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18
|
July 10, 2025
|
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All associations had errors or were insignificant
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11
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29
|
July 9, 2025
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Unable to Download utility_mapping Full Database
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3
|
80
|
July 8, 2025
|
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MetaPhlAn Analysis and Database Customization for Soil Samples
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0
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11
|
July 8, 2025
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Statistical Approach for Comparing Functional Potential of Selected SGBs vs. Community Background
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0
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5
|
July 7, 2025
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No taxa labels after lefse_plot_cladogram.py
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3
|
514
|
July 7, 2025
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Missing Legend in Lefse Cladogram Plot Generated via Conda Environment
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0
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3
|
July 7, 2025
|
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When trying to download 'SwedishTwins_metabolites.csv.gz' it says no such file
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0
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2
|
July 5, 2025
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Only ~3% of UniRef90 gene families are regrouped to KO in HUMAnN3 — advice appreciated
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0
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14
|
July 4, 2025
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Feature request: allow to put fraction with some parameters
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0
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2
|
July 4, 2025
|
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Feature request: phylophlan_write_config_file, force generation of config, despite the lack of a program at PATH
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0
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1
|
July 4, 2025
|
|
Downloading metaphlan4 SGB genomes
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5
|
159
|
July 3, 2025
|
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SGB Newick file labels
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1
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17
|
July 2, 2025
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Question about the unclassified estiamtion
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1
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19
|
July 2, 2025
|
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Question about reproducing a previous metaphlan3 run
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3
|
9
|
July 2, 2025
|
|
Ethiopian tutorial error
|
|
1
|
49
|
July 2, 2025
|
|
Metaphlan: error: unrecognized arguments: --bowtie2db
|
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1
|
17
|
July 2, 2025
|
|
MetaPhlAn 4.2.2 work with humann v3.0.1
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|
1
|
60
|
July 2, 2025
|
|
Can't install MelonnPan -- AssocTests no longer available
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2
|
13
|
July 1, 2025
|
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Metaphlan database has duplicate entries, causing downstream failures
|
|
1
|
13
|
July 1, 2025
|
|
Can't download the Ethiopian genome bins（Ethiopian MAGs））
|
|
0
|
10
|
June 30, 2025
|
|
HUMAnN 4.0.0.alpha.1 calls "old" metaphlan command-line args
|
|
1
|
65
|
June 30, 2025
|
|
HUMANn 4 + MetaPhlAn 4
|
|
5
|
267
|
June 30, 2025
|