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Phylophlan is running too slow when mapping DNA
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3
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739
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October 12, 2022
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PhyloPhlAn cannot use ASTRID for --tree1
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1
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273
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September 15, 2022
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Get all reference error
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1
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343
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September 2, 2022
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Is there a way to use phylophlan_metagenomic with the phylophlan database?
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3
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1037
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September 2, 2022
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Phylophlan running in loop
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1
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306
|
August 26, 2022
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Speeding up PhylophlAn
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1
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461
|
June 30, 2022
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Clades missing in phylogenetic tree
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5
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353
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May 31, 2022
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What are the limitations for number of input sequences?
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6
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438
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May 16, 2022
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How to draw a beautiful evolutionary tree
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3
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876
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April 8, 2022
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Issue with getting reference genomes
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4
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422
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April 2, 2022
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Issues with downloading some reference genomes
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1
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295
|
March 25, 2022
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Build phylogenetic tree from a database
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1
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424
|
March 17, 2022
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Various PhyloPhlAn 3.0 Errors for Nucleotide MAGs and Genomes
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3
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753
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February 23, 2022
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Phylophlan Tree of Life Differences
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2
|
689
|
January 12, 2022
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Phylophlan - creating database of markers
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9
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1322
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November 26, 2021
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Database Download Error
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2
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700
|
November 10, 2021
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Phylophlan3 database in phylophlan command
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5
|
665
|
September 29, 2021
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Just installed PhyloPhlAn 3.0.06, missing the tutorial folder
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2
|
460
|
September 29, 2021
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PhyloPhlAn: Not enought markers
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1
|
632
|
August 30, 2021
|
|
Error on iqtree step
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6
|
2187
|
August 13, 2021
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Prokaryotic tree reconstruction pipeline issue
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5
|
607
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August 9, 2021
|
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Error while executing raxmlHPC-PTHREADS-SSE3
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4
|
899
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July 22, 2021
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Phylophan and Binned fasta
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9
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1211
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July 7, 2021
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Using multiple cores with Mac
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1
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338
|
June 23, 2021
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Phylophlan_metagenomic: unable to download databases
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|
1
|
570
|
June 15, 2021
|
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Unable to create the tree of life: IsADirectoryError: [Errno 21] Is a directory: '/home/ubuntu/phylophlan/PhyloPhlAn.egg-info'
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2
|
1726
|
June 3, 2021
|
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Metagenomic - little confused
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7
|
706
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June 2, 2021
|
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Utterly confused - PhloPhlAn 2 -> PhyloPhlAn 3 - how to characterise MAGs
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2
|
864
|
June 2, 2021
|
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Phylophlan_metagenomic crashed
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|
3
|
593
|
May 10, 2021
|
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PhyloPhlAn 3 - E coli input produces "[e] No alignments found to concatenate"
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2
|
986
|
April 20, 2021
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