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Nothing happens after building phylogeny
|
|
1
|
359
|
October 13, 2022
|
|
No taxonomy in phylogenetic tree generated by phylophlan
|
|
3
|
555
|
October 12, 2022
|
|
Phylophlan is running too slow when mapping DNA
|
|
3
|
774
|
October 12, 2022
|
|
PhyloPhlAn cannot use ASTRID for --tree1
|
|
1
|
276
|
September 15, 2022
|
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Get all reference error
|
|
1
|
353
|
September 2, 2022
|
|
Is there a way to use phylophlan_metagenomic with the phylophlan database?
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|
3
|
1071
|
September 2, 2022
|
|
Phylophlan running in loop
|
|
1
|
322
|
August 26, 2022
|
|
Speeding up PhylophlAn
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|
1
|
483
|
June 30, 2022
|
|
Clades missing in phylogenetic tree
|
|
5
|
377
|
May 31, 2022
|
|
What are the limitations for number of input sequences?
|
|
6
|
474
|
May 16, 2022
|
|
How to draw a beautiful evolutionary tree
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|
3
|
900
|
April 8, 2022
|
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Issue with getting reference genomes
|
|
4
|
440
|
April 2, 2022
|
|
Issues with downloading some reference genomes
|
|
1
|
303
|
March 25, 2022
|
|
Build phylogenetic tree from a database
|
|
1
|
436
|
March 17, 2022
|
|
Various PhyloPhlAn 3.0 Errors for Nucleotide MAGs and Genomes
|
|
3
|
774
|
February 23, 2022
|
|
Phylophlan Tree of Life Differences
|
|
2
|
708
|
January 12, 2022
|
|
Phylophlan - creating database of markers
|
|
9
|
1381
|
November 26, 2021
|
|
Database Download Error
|
|
2
|
714
|
November 10, 2021
|
|
Phylophlan3 database in phylophlan command
|
|
5
|
689
|
September 29, 2021
|
|
Just installed PhyloPhlAn 3.0.06, missing the tutorial folder
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|
2
|
476
|
September 29, 2021
|
|
PhyloPhlAn: Not enought markers
|
|
1
|
647
|
August 30, 2021
|
|
Error on iqtree step
|
|
6
|
2277
|
August 13, 2021
|
|
Prokaryotic tree reconstruction pipeline issue
|
|
5
|
634
|
August 9, 2021
|
|
Error while executing raxmlHPC-PTHREADS-SSE3
|
|
4
|
923
|
July 22, 2021
|
|
Phylophan and Binned fasta
|
|
9
|
1236
|
July 7, 2021
|
|
Using multiple cores with Mac
|
|
1
|
353
|
June 23, 2021
|
|
Phylophlan_metagenomic: unable to download databases
|
|
1
|
582
|
June 15, 2021
|
|
Unable to create the tree of life: IsADirectoryError: [Errno 21] Is a directory: '/home/ubuntu/phylophlan/PhyloPhlAn.egg-info'
|
|
2
|
1741
|
June 3, 2021
|
|
Metagenomic - little confused
|
|
7
|
735
|
June 2, 2021
|
|
Utterly confused - PhloPhlAn 2 -> PhyloPhlAn 3 - how to characterise MAGs
|
|
2
|
874
|
June 2, 2021
|