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Allowing bowtie2 memory mapping in metaphlan
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3
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574
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October 28, 2025
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Connecting SGB ID with fasta of a MAG/genome?
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0
|
78
|
October 28, 2025
|
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Rarecurve on long read from Metaphlan 4.2.2
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3
|
90
|
October 27, 2025
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Best practices for visualizing MetaPhlAn 4 MAG identifiers (SGB, FGB, etc.)?
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1
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93
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October 27, 2025
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MetaPhlan doesn't detect any microbial samples
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2
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74
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October 27, 2025
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ERROR: The Viral Sequence Clusters mode with fasta files requires to specify a SAM output file
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1
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24
|
October 27, 2025
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Metaphlan: sgb_to_gtdb_profile.py fails with KeyError
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3
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140
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October 27, 2025
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Error running fasta files Metaphlan4.2.3
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3
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86
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October 21, 2025
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About duplicate reads
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3
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419
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October 21, 2025
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MetaPhlAn Input for paired end sequences previously filtered?
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2
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66
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October 20, 2025
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MetaPhlAn v4.2.3 installation errors
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2
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98
|
October 20, 2025
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Error encountered when using hclust2.py in the conda-created metaphlan4.2.2 environment on Ubuntu 22 terminal
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0
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50
|
October 15, 2025
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How to Identify Species Names, Potential Functions, and Obtain Sequences for Unnamed Taxa (e.g., s__GGB4550_SGB6273) in Metaphlan 4.2.2 Species Abundance Tables?
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0
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38
|
October 15, 2025
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Extract "Unclassified" sequences
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1
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58
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October 14, 2025
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Inquiry on sgb_to_gtdb_profile database
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1
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55
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September 29, 2025
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How to deal with GGB and SGB species?
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7
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422
|
September 25, 2025
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Make custom metaphlan database by adding some more genomes
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0
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70
|
September 23, 2025
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Prevotella copri clades in MetaPhlAn 4 results
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5
|
78
|
September 22, 2025
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MetaPhlAn unrecognized argument --bowtie2out
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11
|
620
|
September 22, 2025
|
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Absolute abundance from Metaphlan4
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0
|
76
|
September 18, 2025
|
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MetaPhlAn 4.2.2 --profile_vsc
|
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4
|
124
|
September 12, 2025
|
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Metaphlan database problem
|
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3
|
271
|
September 11, 2025
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When parallel runs metaphlan 4 in parallel, the database is occupied.
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1
|
28
|
September 11, 2025
|
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MetaPhlAn 4.1.0: SAM not generated when using --samout with --input_type bowtie2out
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1
|
46
|
September 11, 2025
|
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How to input dual-end data in Metaphlan
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1
|
66
|
September 11, 2025
|
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[Errno 21] Is a directory" during .nwk download & "database partially present" warning
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1
|
72
|
September 11, 2025
|
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When using MetaPhlAn 4.2.2 for species annotation,Ubuntu automatically crashes.
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1
|
34
|
September 11, 2025
|
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Long read minimap2 error
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1
|
36
|
September 11, 2025
|
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Some questions about annotations
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3
|
37
|
September 10, 2025
|
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Downloading metaphlan4 SGB genomes
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|
8
|
402
|
September 9, 2025
|