|
Marker genes are protein-coding?
|
|
0
|
18
|
February 5, 2025
|
|
Update for sgb to GTDB Translation File - r220
|
|
4
|
143
|
February 3, 2025
|
|
How to use metaphlan output
|
|
1
|
75
|
February 2, 2025
|
|
Metaphlan database problem
|
|
2
|
123
|
January 23, 2025
|
|
MetaPhlan 4 can not found BowTie2 database
|
|
3
|
765
|
January 22, 2025
|
|
Possible to get combined profile output instead of R1 and R2 profiles?
|
|
2
|
24
|
January 17, 2025
|
|
cFMD dataset in ChocoPhlAn
|
|
1
|
22
|
January 17, 2025
|
|
Kluyveromyces marxianus is not found in MetaPhlan4 database
|
|
2
|
42
|
January 15, 2025
|
|
MetaPhlAn4 database missing Citrobacter species?
|
|
0
|
36
|
January 14, 2025
|
|
Zero handling for CLR-transformation of relative abundance from MetaPhlAn
|
|
0
|
47
|
January 3, 2025
|
|
calculate_diversity.R Issues
|
|
3
|
57
|
December 16, 2024
|
|
Profile VSC without profiling Bacteria?
|
|
1
|
41
|
December 12, 2024
|
|
Unable to download the CHOCOPhlAnSGB.md5 and other dataset
|
|
1
|
53
|
December 12, 2024
|
|
MetaPhlAn 4.1 virome module not identifying known viruses
|
|
1
|
134
|
November 15, 2024
|
|
Recommended align two fastq files that have different amount of reads
|
|
1
|
28
|
November 8, 2024
|
|
Running MetaPhlAn4.1 to detect both virus and bacteria
|
|
1
|
74
|
November 8, 2024
|
|
Virus detection with metaphlan 4.1
|
|
3
|
182
|
November 8, 2024
|
|
Issue with running StrainPhlAn 4.1 - Error in running ample2markers.py
|
|
2
|
168
|
October 24, 2024
|
|
Strain-Level Abundance using MetaPhlAn4 or StrainPhlAn
|
|
0
|
49
|
October 4, 2024
|
|
Nreads of bowtie2 file
|
|
5
|
304
|
October 1, 2024
|
|
Can we add a column with the number of reads for each taxon next to relative_abundance?
|
|
6
|
448
|
September 26, 2024
|
|
Constructing phylogenetic tree
|
|
7
|
658
|
September 25, 2024
|
|
Metaphlan unclassified output
|
|
2
|
117
|
September 25, 2024
|
|
Deviation in Standard Reference Annotation Results of Metaphlan4
|
|
1
|
34
|
September 24, 2024
|
|
Bacteroidota or bacteroidetes
|
|
4
|
69
|
September 24, 2024
|
|
MetaPhlAn 4.0 is missing the list of marker genes
|
|
1
|
41
|
September 24, 2024
|
|
Strain-Level Abundance: MetaPhlAn2 vs. Newer Versions?
|
|
0
|
41
|
September 23, 2024
|
|
Unable to download MetaPhlAn 4 database
|
|
0
|
282
|
April 2, 2024
|
|
Shared taxonomy ID by multiple species in Segatella
|
|
0
|
35
|
September 5, 2024
|
|
Metaphlan4 calculate_diversity.R error
|
|
7
|
1271
|
August 29, 2024
|