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Further explanation needed re oct22_fix_tax.tsv
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1
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107
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May 27, 2024
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Customizing Chochophlan panproteome and Metaphlan marker gene databases with new taxa
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10
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1258
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May 20, 2024
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Modifying the Chocophlan database
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0
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60
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May 18, 2024
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Issue with MetaPhlAn Database Path
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0
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105
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May 17, 2024
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Metaphlan database issue when running humann
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2
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115
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May 16, 2024
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Unable to run metaphlan (version4) even after downloading database
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1
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88
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May 16, 2024
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MetaPhlAn 4.1 NCBI id mapping
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1
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85
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May 7, 2024
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Unable to run --profile_vsc: UnboundLocalError: local variable 'vsc_fna' referenced before assignment
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2
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84
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April 30, 2024
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Is MetaPhlAn 3 applicable for metatranscriptome data?
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0
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95
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April 10, 2024
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Meaning of 'Processed Reads' in Metaphlan4
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0
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80
|
April 25, 2024
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Can I download newest mpa_latest file manually?
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0
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61
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April 25, 2024
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Metaphlan heatmap
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1
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98
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April 16, 2024
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Metaphlan 4 database during humann3 run
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1
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149
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April 11, 2024
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Ancient DNA microorganisms
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0
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69
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April 9, 2024
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Cannot reproduce results of MetaPhlAn 4.0 tutorial
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4
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661
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September 1, 2023
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Retrieve FASTA files for SGB genomes
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0
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111
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April 1, 2024
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Merge_metaphlan_tables.py doesn't work after converting to GTDB taxonomy
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11
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998
|
March 30, 2024
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Unable to merge virus profile.txt files into table
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1
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161
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March 26, 2024
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Metaphlan with -t marker counts, not producing counts
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2
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140
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March 26, 2024
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Unable to use MetaPhlAn-4 database
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5
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1496
|
March 25, 2024
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Problem with metaphlan2krona.py
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7
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830
|
March 20, 2024
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Merge_metaphlan_tables.py error after fix_relab_mpa4.py
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0
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94
|
March 19, 2024
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Merged abundance table to biom format
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11
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3709
|
March 18, 2024
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Metaphlan 4 parameters for Mouse Gut
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2
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247
|
March 18, 2024
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Differentiating between "kSGBs" and "uSGBs" in MetaPhlAn 4
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1
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161
|
March 11, 2024
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List of Taxonomy IDs in Metaphlan database
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1
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164
|
March 11, 2024
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Find other samples with a same Species
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3
|
105
|
March 11, 2024
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Relative abundances not summing to 100
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3
|
279
|
March 11, 2024
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MetaPhlAn4 overestimates the abundance of Veillonella rogosae
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2
|
274
|
March 7, 2024
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Converting MetaPhlAn3 profiles to GTDB
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1
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295
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March 6, 2024
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