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cFMD dataset in ChocoPhlAn
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1
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28
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January 17, 2025
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Kluyveromyces marxianus is not found in MetaPhlan4 database
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2
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45
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January 15, 2025
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MetaPhlAn4 database missing Citrobacter species?
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0
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40
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January 14, 2025
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Zero handling for CLR-transformation of relative abundance from MetaPhlAn
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0
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65
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January 3, 2025
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calculate_diversity.R Issues
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3
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67
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December 16, 2024
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Profile VSC without profiling Bacteria?
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1
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51
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December 12, 2024
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Unable to download the CHOCOPhlAnSGB.md5 and other dataset
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1
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57
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December 12, 2024
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MetaPhlAn 4.1 virome module not identifying known viruses
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1
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138
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November 15, 2024
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Recommended align two fastq files that have different amount of reads
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1
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29
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November 8, 2024
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Running MetaPhlAn4.1 to detect both virus and bacteria
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1
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78
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November 8, 2024
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Virus detection with metaphlan 4.1
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3
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187
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November 8, 2024
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Issue with running StrainPhlAn 4.1 - Error in running ample2markers.py
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2
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169
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October 24, 2024
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Strain-Level Abundance using MetaPhlAn4 or StrainPhlAn
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0
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56
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October 4, 2024
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Nreads of bowtie2 file
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5
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317
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October 1, 2024
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Constructing phylogenetic tree
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7
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736
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September 25, 2024
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Metaphlan unclassified output
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2
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123
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September 25, 2024
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Deviation in Standard Reference Annotation Results of Metaphlan4
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1
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38
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September 24, 2024
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Bacteroidota or bacteroidetes
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4
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81
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September 24, 2024
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MetaPhlAn 4.0 is missing the list of marker genes
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1
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45
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September 24, 2024
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Strain-Level Abundance: MetaPhlAn2 vs. Newer Versions?
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0
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46
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September 23, 2024
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Unable to download MetaPhlAn 4 database
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0
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312
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April 2, 2024
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Shared taxonomy ID by multiple species in Segatella
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0
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36
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September 5, 2024
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Metaphlan4 calculate_diversity.R error
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7
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1308
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August 29, 2024
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MetaPhlAn viral module
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0
|
80
|
August 22, 2024
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Metaphlan4 Classification Error
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0
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51
|
August 14, 2024
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WARNING: MetaPhlAn did not detect any microbial taxa in the sample
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2
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167
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August 12, 2024
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Announcing MetaPhlAn 4.1 release (new virome database and SGB database update)
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10
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2390
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May 27, 2024
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Percentage of classification
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0
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36
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July 31, 2024
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Auto-updating database seems to break MetaPhlAn4
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4
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287
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July 17, 2024
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Question about calculate_diversity.R
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5
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752
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July 16, 2024
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