Inquiry on sgb_to_gtdb_profile database

Microbial community profiling MetaPhlAn
1

hi

this is not about bug

I could not find the database for “sgb_to_gtdb_profile.py” on version “mpa_vJan25_CHOCOPhlAnSGB_202503” from the datbase website ( http://cmprod1.cibio.unitn.it/biobakery4/metaphlan_databases )

would you let me know how to collect the database?

thanks!

2

Hi @LanSabb

It’s on GitHub MetaPhlAn/metaphlan/utils/mpa_vJan25_CHOCOPhlAnSGB_202503_SGB2GTDB.tsv at master · biobakery/MetaPhlAn · GitHub