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Humann 3.0 error within biobakery_workflows wmgx
|
|
5
|
520
|
April 13, 2023
|
|
Manual Installation of kneaddata_db_human_genome
|
|
2
|
711
|
April 7, 2023
|
|
Long ugly file names of output files by Kneaddata
|
|
7
|
689
|
April 1, 2023
|
|
Issue with humann_regroup_table in biobakery_workflows wmgx
|
|
3
|
285
|
March 29, 2023
|
|
Average abundance (z-score) Heatmap Visualization
|
|
0
|
449
|
March 27, 2023
|
|
Cannot find the bioBakery AMI in Amazon EC2
|
|
2
|
402
|
March 17, 2023
|
|
Kneaddata- any options to checkpoint the runs and resume the runs
|
|
3
|
398
|
March 17, 2023
|
|
KneadData has error in bowtie2_discordant_pairs
|
|
0
|
663
|
March 11, 2023
|
|
Keaddata output is empty
|
|
0
|
368
|
March 3, 2023
|
|
Biobakery workflows with metaphlan4 and humann3
|
|
1
|
372
|
March 3, 2023
|
|
Processing multiple files
|
|
3
|
680
|
March 2, 2023
|
|
Paired end data showing error on --bypass-trim option
|
|
12
|
1371
|
February 28, 2023
|
|
Save SAM outputs files
|
|
0
|
373
|
February 20, 2023
|
|
Cannot install GraPhlAn
|
|
2
|
598
|
February 14, 2023
|
|
Interpreting read_count_table Numbers?
|
|
0
|
333
|
February 9, 2023
|
|
Questions about the read count table pulled from kneaddata logs
|
|
1
|
549
|
February 8, 2023
|
|
Deletion of data / Secondary use of data
|
|
1
|
234
|
February 3, 2023
|
|
Kneaddata - a non very explicit error message
|
|
3
|
1329
|
February 2, 2023
|
|
There are less reads survived after kneaddata
|
|
5
|
1095
|
January 23, 2023
|
|
Update to the latest version of biobakery_workflows
|
|
0
|
270
|
January 18, 2023
|
|
Total reads after trimming is the SAME as Initial number of reads
|
|
0
|
277
|
January 5, 2023
|
|
Err: ERROR: Unable to find trf. Please provide the full path to trf with --trf
|
|
0
|
500
|
January 5, 2023
|
|
HUMAnN conda installation dependency issues
|
|
1
|
863
|
December 22, 2022
|
|
Biobakery_workflows wmgx_vis error
|
|
0
|
428
|
May 15, 2022
|
|
Error for humann
|
|
0
|
201
|
May 19, 2022
|
|
Wmgx_wmtx visualization rna_dna_norm.py failure
|
|
0
|
260
|
July 15, 2022
|
|
[wmgx workflow] Discrepancy in total read counts between kneaddata and humann
|
|
3
|
443
|
December 15, 2022
|
|
Kneaddata paired reads?
|
|
0
|
370
|
December 8, 2022
|
|
For developer:it hard to download database when install biobakery_workflows
|
|
0
|
349
|
December 2, 2022
|
|
Issue with KneadData database download
|
|
1
|
505
|
November 29, 2022
|