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Strainphlan sample2markers.py AttributeError: 'NoneType' object has no attribute 'reference_free_consensus'
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3
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382
|
August 5, 2021
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Single dominant species in non-gut microbiome
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2
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235
|
December 11, 2021
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Multiple interrelated species (Streptococci)
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3
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459
|
November 29, 2021
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Biobakery workflows strainphlan failed due to makeblastdb error
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2
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703
|
November 19, 2021
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Where can i get metaphlan_databases information？
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1
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338
|
October 26, 2021
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Understanding StrainPhlAn for beginners
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3
|
1549
|
September 29, 2021
|
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Length of concatenated alignment file
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12
|
520
|
August 31, 2021
|
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Identifying Strain Names
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1
|
738
|
August 23, 2021
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Distmat from strainphlan tutorial
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|
1
|
515
|
July 22, 2021
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Check number of markers for a particular bacterial species
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1
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260
|
July 22, 2021
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Change coverage threshold for consensus markers
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3
|
425
|
June 15, 2021
|
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Help with workflow
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3
|
480
|
June 15, 2021
|
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"N" in strainphlan alignment output
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6
|
683
|
June 10, 2021
|
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Understanding branch length from strainphlan output
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3
|
471
|
June 9, 2021
|
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Metaphlan & Strainphlan Output Expectation
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2
|
709
|
May 29, 2021
|
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Strainphlan_config & Not found output/mutation_rates.tsv
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1
|
415
|
May 3, 2021
|
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Error when running extract_markers.py
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22
|
3170
|
April 22, 2021
|
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Strainphlan Error: No matching key/data pair found
|
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1
|
559
|
April 19, 2021
|
|
Problem running StrainPhlan
|
|
5
|
1160
|
April 9, 2021
|
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Multiple reference genomes not in the output tree
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4
|
802
|
March 26, 2021
|
|
Run all clades once
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5
|
839
|
March 19, 2021
|
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Strainphlan question on get the strain info
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3
|
1199
|
March 8, 2021
|
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Error running strainphlan
|
|
9
|
1954
|
February 12, 2021
|
|
Strainphlan without an internet connection
|
|
14
|
1090
|
February 12, 2021
|
|
Verbose output for strainphlan
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1
|
275
|
February 8, 2021
|
|
Output phylogeny from [tree1] not recognized
|
|
2
|
421
|
February 8, 2021
|
|
Strainphlan sample2markers.py no module named cmseq
|
|
8
|
713
|
February 4, 2021
|
|
Tutorial is listing the wrong docker container
|
|
1
|
411
|
February 4, 2021
|
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QUESTION: StrainPhlAn working with a genome?
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|
3
|
887
|
January 18, 2021
|
|
Strainphlan_print_clades failed using BioBakery Docker Container
|
|
1
|
351
|
January 15, 2021
|