How to get mpa_vOct22_CHOCOPhlAnSGB_202212.nwk for calculate_diversity.R? I want to calculate the Unifrac distance
Unfortunately, as stated in the announcement of the new release, the phylogenetic tree of the SGBs present in vOct22 is not ready yet. We are currently working on it and we will announce it in the forum and other sources (like twitter) when available.
Thanks for the new release, I am looking forward to integrating it into my pipelines. Further to pangkghm’s question, I just wonder if there is a timeline on when we might expect the newick tree to be released? I’d like to move to the latest database for pipelines but would wait for newick tree to be within the chocophlan release. Thanks!