I have the kneaddata installed by running “pip install kneaddata==0.9.0”, and it says “Successfully installed kneaddata-0.9.0”. However, when I run “kneaddata --version”, get the following message “kneaddata v0.8.0”, which doesn’t match the version I specified in the installation command.
There maybe some mistake in line 77 of (kneaddata/knead_data.py at master · biobakery/kneaddata · GitHub)"
Hi @Yong,
This might be because of the python version inconsistency in your system. Can you try python -m pip kneaddata==0.10.0 command please ?
Regards,
Sagun