I hope this message finds you well. I am encountering an issue while trying to install Humann3 through conda (miniconda3), specifically… stalling at the “solving environment” step.
Here are the details of the issue I am experiencing:
When I execute:
conda install humann -c biobakery
The installation process gets stuck at the “solving environment” step and does not proceed further. I have allowed it to run for an extended period, but it does not show any progress.
Steps I have taken so far to troubleshoot the issue:
Updated Conda: I have updated Conda to the latest version using the “conda update conda” command.
Cleared Conda cache: I have cleared the Conda package cache using the “conda clean -a” command.
Attempted alternative channels: I have tried specifying different channels using the “-c” option, such as “conda-forge” and “biobakery”.
Created a new environment: I have created a fresh environment using the “conda create -n biobakery3” command and attempted the installation within this new environment. However, the issue persists.
I have confirmed the below commands regarding channels were run:
conda config --add channels defaults conda config --add channels bioconda conda config --add channels conda-forge conda config --add channels biobakery
Any assistance that can be provided would be much appreciated! Not sure why I am getting stuck!