Hello to everyone!
I just downloaded humann for analysis with the following steps:
$ python setup.py install
Then I try the test ($ humann_test) and I had zero error so I download the database:
humann_databases --download chocophlan full /path/to/databases --update-config yes
humann_databases --download uniref uniref90_diamond /path/to/databases --update-config yes
humann_databases --download utility_mapping full /path/to/databases --update-config yes
I check the version and I have:
$metaphlan --version
MetaPhlAn version 4.1.1 (11 Mar 2024)
$ humann --version
humann v4.0
I thought I did everything correctly but when I try to examine the demo files I get this error:
$ humann --inples/demo.fastq --output prova
Creating output directory: /media/michelafrancesconi/My Book/l3lung/humann/prova
Output files will be written to: /media/michelafrancesconi/My Book/l3lung/humann/prova
Running metaphlan ........
ERROR: The MetaPhlAn taxonomic profile provided does not contain the database version vOct22 in any of its heade
What should I do?
Thank you, Michela