Hello, I am a new to bioBakery. I have a DNAseq dataset with a lot of metadata information such as different experiments, sample categories.
I find a mapping file in the tutorial is really simple like this
| # wts |
wms |
| wts_1 |
wms_1 |
| wts_2 |
wms_2 |
I am wondering if I would like to do downstream analysis. For example, group my samples in different categories, do nMDS anaylses etc.
What is the mapping file looks like for “real research data”
I used something like this in my recent analysis.
Regards
Mehdi
Thank you!
BTW, the first column “barcode_type” is the just a sample name? or it has to be exact be same as the fastq file name in the input folder?
OR you have another several fastq/fasta file list of each barcode sequences? Do you mind take a screen snapshots of your input file folders? I use Paired-end sequencing. For each sample, you should have two names in your first column (foward and reverse)?
