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Humann 3.0 error within biobakery_workflows wmgx
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5
|
567
|
April 13, 2023
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Manual Installation of kneaddata_db_human_genome
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2
|
744
|
April 7, 2023
|
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Average abundance (z-score) Heatmap Visualization
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0
|
474
|
March 27, 2023
|
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Cannot find the bioBakery AMI in Amazon EC2
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2
|
450
|
March 17, 2023
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Biobakery workflows with metaphlan4 and humann3
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|
1
|
398
|
March 3, 2023
|
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Update to the latest version of biobakery_workflows
|
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0
|
273
|
January 18, 2023
|
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Err: ERROR: Unable to find trf. Please provide the full path to trf with --trf
|
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0
|
521
|
January 5, 2023
|
|
HUMAnN conda installation dependency issues
|
|
1
|
908
|
December 22, 2022
|
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Biobakery_workflows wmgx_vis error
|
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0
|
439
|
May 15, 2022
|
|
Error for humann
|
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0
|
207
|
May 19, 2022
|
|
Wmgx_wmtx visualization rna_dna_norm.py failure
|
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0
|
281
|
July 15, 2022
|
|
For developer:it hard to download database when install biobakery_workflows
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0
|
356
|
December 2, 2022
|
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Visualisation workflow will fail if path contains dash (-) character
|
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0
|
285
|
November 9, 2022
|
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Biobakery Workflows: Errors with downloading database, "unpicking error", “topological_sort()" error, and "Unable to find Trimmomatic" error
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|
7
|
3114
|
November 7, 2022
|
|
ValueError: Unable to find binary or script `metaphlan’
|
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0
|
239
|
November 2, 2022
|
|
Error wmgx: TypeError: 'zip' object is not subscriptable
|
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0
|
275
|
October 27, 2022
|
|
Strainohlan problem inside biobakery workflows
|
|
1
|
337
|
October 18, 2022
|
|
Could not find "makeblastdb" executable in your PATH environment
|
|
5
|
2721
|
September 12, 2022
|
|
UnboundLocalError: local variable 'qmax' referenced before assignment
|
|
2
|
1592
|
September 6, 2022
|
|
Any plans to update biobakery/workflows docker image with Metaphlan 4?
|
|
0
|
537
|
August 31, 2022
|
|
Graphics card processor
|
|
0
|
229
|
August 23, 2022
|
|
Internal Bowtie 2 exception (#1) Error Downloading Biobakery_workflows reference databases
|
|
4
|
1478
|
August 16, 2022
|
|
All task fails - Biobakery workflows wmgx
|
|
1
|
354
|
August 9, 2022
|
|
Error in rna_dna_norm.py code when mapping samples during wmgx_wmtx worfklow
|
|
0
|
242
|
July 19, 2022
|
|
Could not find "mafft" ("False")
|
|
0
|
289
|
July 15, 2022
|
|
Biobakery_Workflows wmgx: TypeError
|
|
6
|
1592
|
July 5, 2022
|
|
Biobakery conda install: can't run example data
|
|
0
|
430
|
June 30, 2022
|
|
Problems with Conda environment and biobakery_workflows in cluster
|
|
3
|
737
|
June 22, 2022
|
|
Run biobakery_workflows wmgx example failed, maybe some problems in shotgun.py
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|
0
|
391
|
May 31, 2022
|
|
Biobakery_workflows wmgx
|
|
1
|
819
|
May 30, 2022
|