Will MetaPhlAn work for microbiome, mycobiome and virome analysis?

I have a conceptual query about MetaPhlAn. If I have shotgun metagenomic sequencing data from human gut samples, Would I be able to analyze the bacterial, fungal and viral composition from the same sequencing file? Are there any additional steps that would be required for this task?
Thanks in advance!


Hi @Varunj_99
Yes, the latest version 4.1 with the Jun23 database will work on all 3 analyses