The bioBakery help forum

LEfSe output table & pvalue

Downstream analysis and statistics LEfSe
#1

Hi,
I am new to LEfSe and have a basic question about the results provided by LEfSe. The tool provides 5 column table with no column heading. I understand that, column 1 is the feature being tested.

  1. What are the values in the other columns?
  2. Are the pvalues given corrected for multiple hypothesis testing ? if not should we do multiple hypothesis correction?
1 Like
#2

I am also wondering the same thing.