Failed Data Upload

Downstream analysis and statistics LEfSe
1

Hello,

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When I try uploading Data for the Lefse on the Galaxy / Hutlab server ( Galaxy (harvard.edu)) I get this really weird error, which Ive never gotten before, which I also get with files I know I’ve uploaded successfully in the past.

The Error is:

Status: failed: please make sure the file is available. (500)

I tried uploading a txt file and when that didnt work, I tried just pasting the content of the file into the paste/fetch option, as the error suggested there was an issue with the localisation of the file, but that did not work either…

Is this a new thing? I saw that there’s a new version of the site available, which I cannot seem to load… is this happening to anyone else?

I initially flagged this error on the Galaxy help forum, but was told they do not monitor the Huttenhower Galaxy servers, and was directed here.

Thanks for your help!!

Cheers,
June

2

I am having the same issue. Is the site down?

3

Hi,
I had same problem. But if you checked the announcement, they said a new galaxy2.0 platform have already been setup, and old one is closed.
hope it can help you

4

Hello @Erika and @weiranmm ,

Thank you for reaching out to biobakery lab and pointing out the issue. We are looking into file upload issue in https://huttenhower.sph.harvard.edu/galaxy.

Please feel free to try out version 2.0 Galaxy http://galaxy.biobakery.org/ in the mean time till the issue is resolved. Also, please note that https://huttenhower.sph.harvard.edu/galaxy will be deprecated after June 1st 2023.

Regards,
Sagun

5

Hello @Erika and @weiranmm ,

The 500 error upload issue has been resolved in Galaxy. Please let me know if any other issues.

Regards,
Sagun