metaphlan --install
Thu Jun 11 10:07:40 2026: Downloading http://cmprod1.cibio.unitn.it/biobakery4/metaphlan_databases/mpa_latest
Thu Jun 11 10:07:40 2026: Downloading file of size: 0.0000 MB
Thu Jun 11 10:07:40 2026: MetaPhlAn database not present or partially present in /home/romilab-ws1/miniconda3/envs/humann_env/lib/python3.10/site-packages/metaphlan/metaphlan_databases.
Downloading database
Please note due to the size this might take a few minutes.
Thu Jun 11 10:07:40 2026: Downloading and uncompressing bowtie2 indexes
Thu Jun 11 10:07:40 2026: Downloading http://cmprod1.cibio.unitn.it/biobakery4/metaphlan_databases/bowtie2_indexes/mpa_vJan25_CHOCOPhlAnSGB_202503_bt2.tar
Thu Jun 11 10:07:41 2026: Downloading file of size: 33433.5645 MB
Thu Jun 11 10:09:35 2026: [Error] EnvironmentError “[Errno 104] Connection reset by peer”
Unable to download http://cmprod1.cibio.unitn.it/biobakery4/metaphlan_databases/bowtie2_indexes/mpa_vJan25_CHOCOPhlAnSGB_202503_bt2.tar
Thu Jun 11 10:09:35 2026: Stop execution.
the download stops at around 1.4 GB every single time