MetaPhlAn version 3.0
Command-
metaphlan --install
Downloading https://www.dropbox.com/sh/7qze7m7g9fe2xjg/AAA4XDP85WHon_eHvztxkamTa/file_list.txt?dl=1
Error-
Warning: Unable to download https://www.dropbox.com/sh/7qze7m7g9fe2xjg/AAA4XDP85WHon_eHvztxkamTa/file_list.txt?dl=1
Traceback (most recent call last):
File “/home/gmpl/miniconda3/envs/bsc_metagenome/bin/metaphlan”, line 10, in
sys.exit(main())
File “/home/gmpl/miniconda3/envs/bsc_metagenome/lib/python3.6/site-packages/metaphlan/metaphlan.py”, line 1187, in main
pars[‘index’] = check_and_install_database(pars[‘index’], pars[‘bowtie2db’], pars[‘bowtie2_build’], pars[‘nproc’], pars[‘force_download’])
File “/home/gmpl/miniconda3/envs/bsc_metagenome/lib/python3.6/site-packages/metaphlan/metaphlan.py”, line 589, in check_and_install_database
index = resolve_latest_database(bowtie2_db, ls_f[‘mpa_latest’], force_redownload_latest)
UnboundLocalError: local variable ‘ls_f’ referenced before assignment