|
Precomputed SHORTBRED markers for dbCAN?
|
|
0
|
372
|
January 11, 2022
|
|
ShortBRED identify gives no markers
|
|
3
|
777
|
January 4, 2022
|
|
Shortbred returns all zero count
|
|
1
|
475
|
November 5, 2021
|
|
Specifying strands in USEARCH within shortbred_quantify
|
|
4
|
814
|
October 24, 2021
|
|
ShortBRED installation/dependency errors
|
|
3
|
1500
|
March 22, 2021
|
|
How to add description information?
|
|
4
|
511
|
September 16, 2021
|
|
UniRef90 or UniRef100 for building markers with ShortBRED-Identify?
|
|
2
|
688
|
July 9, 2021
|
|
Fastq.gz file as input for ShortBRED?
|
|
2
|
884
|
June 4, 2021
|
|
Fatal Error: not enough memory, please set -M option greater than 1240
|
|
1
|
1170
|
April 29, 2021
|
|
Non-printing character 0x00 in sequence FASTA file ERROR
|
|
9
|
788
|
April 27, 2021
|
|
Blast db build fail
|
|
1
|
1633
|
March 25, 2021
|
|
Reverse "normalize by number of reads in the sample"
|
|
0
|
386
|
March 19, 2021
|
|
CARD pre-built marker
|
|
1
|
601
|
March 15, 2021
|
|
Biopython, pip and Python-2 deprecation
|
|
1
|
662
|
February 22, 2021
|
|
Normalize ShortBRED Reads
|
|
6
|
1594
|
February 5, 2021
|
|
Fatal error Usearch 64-bit needed
|
|
0
|
562
|
January 31, 2021
|
|
ImportError: Bio.Alphabet has been removed from Biopython
|
|
2
|
9512
|
November 27, 2020
|
|
Usearch_local for quantification
|
|
1
|
349
|
August 28, 2020
|
|
Shortbred identify performance with CARD and Uniref90
|
|
0
|
754
|
July 30, 2020
|
|
ARO id to antibiotics clusters
|
|
2
|
659
|
June 25, 2020
|
|
Creating markers after blasting
|
|
5
|
737
|
April 1, 2020
|