CARD pre-built marker

Microbial community profiling ShortBRED
1

The link on the official shortbred webpage

https://huttenhower.sph.harvard.edu/shortbred/

to the pre-built CARD markers seems broken.

https://bitbucket.org/biobakery/shortbred/downloads/ShortBRED_CARD_2017_markers.faa.gz
https://bitbucket.org/biobakery/shortbred/downloads/ShortBRED_VF_2017_markers.faa.gz

Is there possibility to access them

Thanks!

2

Hi Pascale,

Thank you for pointing out the broken bitbucket links in the shortbred webpage.

The links have been updated and fixed now: ShortBRED – The Huttenhower Lab.

Additionally, assets available for download here as well.

Regards,
Sagun