Thanks for this very great tool.
I have been trying to upload my dataset and recurrently, I have been getting the following error when trying to run the command:
ccrepe.results <-ccrepe(x = otuY, iterations = 20, min.subj = 10, make.output.table = TRUE)
I produced my dataset from a phyloseq object and I have tried many ways to upload it and formatted it following the tutorial, however I always get the “$ operator error”
That’s how my dataset looks like
I have been formatting data sets for a day and a half to the border of paranoia, so any tip will be really appreciate